Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1395 ATGGAGGAAGGGTACTCCAGAAGCAAGTTCAAGACGCTGTGTGTCTTCTGTGGCAGCAACTCTGGCAACAGGCAGGTTTTCAGTGACGCTGCGATTCAATTGGGCAATGAACTGGTTAAGAGGAACATAGACTTGGTGTATGGTGGGGGAAGTGTTGGGCTAATGGGCTTAATATCCCAGAGAGTGTATGATGGAGGCTGCCATGTTCTAGGGATCATTCCAAAAGTTCTCATGCCTCTTGAGATATCTGGTGAAACAGTAGGTGAAGTGAGAATTGTCTCAGATATGCACGAGCGTAAAGCTGCAATGGCTCAAGAAGCTGATGCATTTGTTGCTCTCCCTGGAGGATATGGTACCATGGAAGAGCTGTTGGAGATGATAACTTGGGCCCAACTTGGAATTCATAAAAAACCGGTTGGTCTACTGAATGTGGACGGTTACTATAACTGTTTGCTTGCATTATTTGACAATGGTGTTAAAGAAGGCTTTATCAAGCCTGGTGCACGGAATATAGTCGTCTCTGCTTCTTCAGCCAAAGAACTTATGATGAAGATGGAGTATTACACTCCTTCACATGAACATGTTGCCCCTCATGAGAGCTGGCAGATGAAGCAATTAGGTAATTATCCAGGACGAGAGAATGCAGAGTGA 651 0.4516 MEEGYSRSKFKTLCVFCGSNSGNRQVFSDAAIQLGNELVKRNIDLVYGGGSVGLMGLISQRVYDGGCHVLGIIPKVLMPLEISGETVGEVRIVSDMHERKAAMAQEADAFVALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVKEGFIKPGARNIVVSASSAKELMMKMEYYTPSHEHVAPHESWQMKQLGNYPGRENAE* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1395 216 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
Apr5g1395 216 PANTHER LOG FAMILY PROTEIN YJL055W 8 206 - -
Apr5g1395 216 TIGRFAM TIGR00730: TIGR00730 family protein 11 188 IPR005269 GO:0009691|GO:0016787
Apr5g1395 216 SUPERFAMILY MCP/YpsA-like 9 186 - -
Apr5g1395 216 Gene3D - 10 204 - -
Apr5g1395 216 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 8 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1395 Apr-Chr5 18081124 18083880 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1395 K22522 - gmx:100785484 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0287 9 3769438 3771945 Apr5g1395 5 18081124 18083880 PCT