Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1370 ATGGCTTCTGCTTCTGTTACGATGGCTTTGCCAATGATCTCTGCAACCCAGAAGCCATCCTCCGAAGCCTTCTTCAGGCCGTTACCCTTAAGACAACCAAAGAGGACCCTCTTTACAAAATCCAAGGTTGAAATTCATGCATCTTTGAAGGAGAAGGCACTGACAGCAATTACAACTGCTTCCTTCACAGCTTCTATGGTTATTCCTGAGGTGGCTCATGCTGCAGGATCTGATCTCACCCCATCTCTCAAGAACTTTCTACTCAGCATTTTTGCTGGTGGGGTTGTGCTTGGAGCCATATTTGGAGCTGTTATTGGCGTTTCCAACTTTGATCCGGGCTCCACTCATTCAAATTCTTACATACTTTTTGAGTGTTTGTACGGAATTCCTCAAAACATAACGTGCCATGAAAGATTGAATTTGTTTCCGCACGTTACTTTTGAGGTTAATTCTACACTCAGCACAACAAAGTATACATGA 480 0.4354 MASASVTMALPMISATQKPSSEAFFRPLPLRQPKRTLFTKSKVEIHASLKEKALTAITTASFTASMVIPEVAHAAGSDLTPSLKNFLLSIFAGGVVLGAIFGAVIGVSNFDPGSTHSNSYILFECLYGIPQNITCHERLNLFPHVTFEVNSTLSTTKYT* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1370 159 Gene3D Single helix bin 78 112 - -
Apr5g1370 159 Pfam Photosystem II reaction centre X protein (PsbX) 80 112 IPR009518 GO:0009523|GO:0015979|GO:0016020
Apr5g1370 159 PANTHER OS07G0673550 PROTEIN 2 112 - -
Apr5g1370 159 PANTHER OS07G0673550 PROTEIN 2 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1370 Apr-Chr5 17912331 17914003 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1370 - - aprc:113864756 313.153