Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1366 ATGATAGCTTACCTGGAGCACTTCGTGCATGCAAACGACACTGAATCCAGCCAAGACGACGACGTTTCAAGCCTGTCCAAGGCGCTTGACCTTCAAGCCACCACCGACGACTGCGGCCCCGCCGGAATCGCCACCAAAGATTTCGGCGGCATGAAATCCGTCAAACCCTTGGCCTTCATAAGACCAGCCTCCGCCGCCGACGTCGCTCGAGTGGTGACAGCGGCGGCGAAGTTTCCGAATCTGACGGTGGCGGCGCGAGGGAATGGACACTCGATAAACGGCCAGGCCATGGCGGAGCAAGGAGTGGTCCTGGACATGCGCGGCATGGAGGATTTTGAGGTTGTGTGGATAGATGGCTCGCCTTACGTGGACGTTTCGGGAGGGGCATTATGGGAATACGTCCTTAAACGGTGCGTTCTGGAGTTCGGACTAGCCCCGAGATCGTGGACGGATTATCTGGGTTTAACGGTGGGAGGAACCTTGTCCTACGCTGGCGTTAGCGGTCAAGCTTTCCGTTACGGTCCACAGACATCGAACGTAACGGAATTGGAAGTTGTAACTGGGAAAGGCGAAACGTTGTGTTGCTCACAAACCCAAAACTCTGAGCTTTTCTTTGGTGCGCTTGGTGGTTTAGGACAATTCGGTATTATTACCAAAGCTAGAGTCGTTCTTCAACGACCTCCAGATATGGTGAGATGGATAAGGGTTGTTTACTCTGAATTTGAGGACTTCGCTGGGGATGCAGAGTGGCTAGTGGTTGAAGGGAAGTGCTCTGACTACGTTGAAGGCTTCGTTTTTGTGAACAAAGATGAGCCCACCAATGGATGGCCCACTGTGCCATTGGACCCGGAACAGGTGTTCGACCCGATTCATATCCCTCCCGGTGCTGGCCCAGTCCTATATTGCTTGGAACTCGCTCTTCACTATCGCAACCAGGATCATCCTTCTCACGTTGATACGAATGTGAGTGGATTGCTTGGACGGCTACGATTCATTGAGGGTCTGAAGTTCCAGTTGGACGTGGGATACATGGAGTTCTTGCTACGTGTAAAGCGTGTGGAGGAACACGCAAAACGCAACGGCACCTGGGATGCGCCTCATCCTTGGCTGAACCTGTTCGTGCCACAGTCGAACATGGTTGATTTTGATCGTGAGGTGTTCAAGAAGATCCTCAAGAACGGGGTCGATGGGCCCATTTTAGTCTACCCCCTCTTGCGAAACAAGTGGGACAGTCGTCACTCGGTGGTGGTGCCGGACAGCGACATCTTCTACATAGTAGCATTGCTCCGATTTACTCCACCACCCCCAAAGGGACCACCCACTGAATTCTTGGTGGAGCAAAACCATGAGATTATTCGGTTTTGCTCAAGCAGAGGCTTTGATTTCAAGCTATACTTTCCTCACTATCAGTCACGAGAGGAATGGATGAAACACTTTGGGAATCAATGGACCAGATTTCTGGAGAGAAAAGTCAATTTTGACCCTATGGCTATCCTTGCGCCAGGACAGAAAATCTTCTCCAGAATCTCTCAACCTTGCTCAATCACATAA 1551 0.5164 MIAYLEHFVHANDTESSQDDDVSSLSKALDLQATTDDCGPAGIATKDFGGMKSVKPLAFIRPASAADVARVVTAAAKFPNLTVAARGNGHSINGQAMAEQGVVLDMRGMEDFEVVWIDGSPYVDVSGGALWEYVLKRCVLEFGLAPRSWTDYLGLTVGGTLSYAGVSGQAFRYGPQTSNVTELEVVTGKGETLCCSQTQNSELFFGALGGLGQFGIITKARVVLQRPPDMVRWIRVVYSEFEDFAGDAEWLVVEGKCSDYVEGFVFVNKDEPTNGWPTVPLDPEQVFDPIHIPPGAGPVLYCLELALHYRNQDHPSHVDTNVSGLLGRLRFIEGLKFQLDVGYMEFLLRVKRVEEHAKRNGTWDAPHPWLNLFVPQSNMVDFDREVFKKILKNGVDGPILVYPLLRNKWDSRHSVVVPDSDIFYIVALLRFTPPPPKGPPTEFLVEQNHEIIRFCSSRGFDFKLYFPHYQSREEWMKHFGNQWTRFLERKVNFDPMAILAPGQKIFSRISQPCSIT* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1366 516 ProSiteProfiles PCMH-type FAD-binding domain profile. 52 227 IPR016166 GO:0071949
Apr5g1366 516 SUPERFAMILY FAD-linked oxidases, C-terminal domain 228 506 IPR016164 GO:0003824|GO:0050660
Apr5g1366 516 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 228 506 IPR015345 GO:0009690|GO:0019139|GO:0050660
Apr5g1366 516 Gene3D - 106 229 IPR016169 -
Apr5g1366 516 Gene3D - 44 507 IPR016167 -
Apr5g1366 516 Gene3D - 231 465 IPR016170 -
Apr5g1366 516 SUPERFAMILY FAD-binding/transporter-associated domain-like 44 224 IPR036318 GO:0050660
Apr5g1366 516 Pfam FAD binding domain 56 195 IPR006094 GO:0050660
Apr5g1366 516 PANTHER GULONOLACTONE OXIDASE 11 511 - -
Apr5g1366 516 PANTHER CYTOKININ DEHYDROGENASE 7 11 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1366 Apr-Chr5 17873007 17876731 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1366 K00279 - gmx:100795849 850.506