Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1365 ATGTCGTTTGACGACGTGGAAAGGGTTTCGTCCAACCGGCGCCGTTTTGACGGAGAGGGTAGTTCCGATTCTTCTGATGTCGCTGATGGTACTCGCGATTCGCAACGCAAGCGAGCCAAAGTTTACGATGATTTCGACGGCTCTCATTGTGCAATTCCAAGGTCTTCGAGTGCTGGGGAACCAATTGCGTCTGCTGAAAATGGGGATTGTGATAATTTTGAAGGCTCATCTCTTCGATCCAAAAATGATGCGTTTAGGTTGATGTCCGCTGGTGAGGAGAGTAACTTTGATTCTAGTTCTGTGAAAGACGGTGAAGGAGACGACCGTGACATGTCAGAAGCAGATGATCTAGAGGTCAAGATGGATCTCACAGACGATTTATTGCATATGGTTTTCTCGTTTTTGGATCATCCCAATCTCTGCAAAGCTGCCAGGGTTTGTAAGCAGTGGCGAACTGCTAGTGCCCATGAAGACTTCTGGAGGATTTTGAATTTTGAAGATCGGCACATATCTGTAGAGCAATTTGAGGATATCTGCAGAAGTTATCCCAATGCCACAGCAATCAGCATATCTGGTTCTTCCATTTACTTCCTTGTCATGAAGGCTATCTCTTCATTAAGAAATCTCGAGGTTTTAACATTGGGCAGAGGACATATAGCGGACAGTTTTTTCCATGCTTTGGCCGATTGTTCTATGTTGAAAAGACTGAGCATCAATGATGCCATACTTGGCAGTGGTATTCAGGAGATATCAATTAATCATGACAGGTTGTGTCATCTTCAGTTAATAAAATGTCGTGTGATGCGAATAGCAGTCAGGTGCCCACAACTTGAAACTATGTCATTGAAGCGCAGTAACATGGCACAGGCTGTGCTTAATTGCCCACTTTTGCAAGAGCTTGATGTTGGCTCCTGCCACAAACTGCCCGATTCTGCTATTCGCTCAGCTGCAACATCATGCCCGCAATTAGTTTCTCTGGACATGTCTAACTGTTCTTGTGTTAGTGATGAAACATTACGGGAAATATCGCTGAATTGTGCTAACCTTAGCTTTCTTGATGCATCGTACTGCCCAAACGTATCTTTGGAGTCTGTTAGACTGCCAATGTTGACTGTTCTGAAGCTGCACAGTTGTGAAGGAATTACCTCAGCCTCAATGGCTGCAATATCTCATAGTTATATGTTGGAGGTTCTGGAGTTTGATAATTGTAGCCTGTTGACTTCAGTGTCTTTAGATCTTCCCCGACTGCAGAATATTAGATTGGTACACTGTCGCAAATTTGCTGATTTGAACTTGATGACCATAATGCTTTCTTCTATTTTGGTGTCAAATTGCCCTGCGCTTCACTGTATCAACATCACTTCAAATTCACTTCAAAAATTAGCAATACCAAAGCAGGACAGTTTAACCACATTAGCTCTGCAATGCCAATCTTTACAAGAAGTGGATCTCTCTGAGTGTGAATCTTTGACTAACTCTGTATGCAATGTTTTTAGTGATGGTGGAGGATGCCCAATGTTAAAATCGTTAGTTCTTGATAATTGCGAGAGTTTGACATCAGTTCAATTCATCAGTACCTCTTTAATCAGCCTTTCCCTTGGTGGTTGCCGGGCAATTACTAATCTTGATCTCACATGCCCTAATCTTGAGAAAGTTATTTTGGATGGTTGTGATCATTTGGAAAGAGCTTCATTTTGTCCAGTTGGTCTTTCATATCTCAATTTGGGAATATGTCCAAAATTAAACACACTAAGCATTGAAGCACCATCTATGGTTTCACTTGAGTTGAAAGGATGTGGCGTACTATCTGAAGCACTCATTAATTGTCCACTCTTAATATCTCTGGATGCCTCCTTTTGCAGCCAGCTGACAGATGACTTCTTGTCTGCAACAACTGCCAAATGCCCACGGATTGAATCATTGATATTAATGTCATGCTCATCAATTGGTTCAAAAAGTCTTCATTCTCTGTATGGGCTTCCGAATTTGACTGTTCTTGACTTATCATACACTTTCTTGGTGAACTTGCAGCCTGTTTTTGAATCTTGTTCTAATCTAGAGGTGTTAAAGTTGCAGGCATGCAAATATCTCACTGACACATCACTTGAACCTCTTTACAAAGGAGGTGCGTTACCAGCACTTCAGGAGTTGGACCTGTCTTATGGAACCCTCTGTCGGTCAGCCATAGACGAGCTTCTTTCTTGCTGCACAAACCTCACTCATGTGGGTTTGAATGGCTGTGTGAATATGCATGATTTGAATTGGGGAAACAGTCGTGGGCAGATTGACTATTTGCCTGCTGCAAACACTCCATTGGGGGCAATTTCTCATGAGAATGTCCGCGAAACAAGTGAGCAATCTACCCGCTTACTGCAGAACCTCAATTGTGTCGGATGTCCAAATATTAGGAAGGTTGTCATTCCATTGAGGGCAGATTGTTGCCATTTATCATCTTTAAAGCTTTCACTGTCAGCAAATTTGAAAGAGGTTGATGTTACATGTCTCAACTTATCTGTTCTTTCTTTAAGCAATTGTTCCTCTTTGGAAATTTTGAAGCTAGAGTGTCCAAGATTGACCTCTCTATCCCTTCAGTCGTGCAATATTGGTGAAGAAGCTGTTGAAGCTGCTATTTCAAAATGCACTATGCTGGAGACTCTTGATGTTCGCTGTTGTCCAAAGATAAGCTCAATGAGCATGGGGAGATTCCGTGCAATTTGTTCAAGATTGAAGTGTATATACAGCAGCATGTCTACTTAA 2757 0.4211 MSFDDVERVSSNRRRFDGEGSSDSSDVADGTRDSQRKRAKVYDDFDGSHCAIPRSSSAGEPIASAENGDCDNFEGSSLRSKNDAFRLMSAGEESNFDSSSVKDGEGDDRDMSEADDLEVKMDLTDDLLHMVFSFLDHPNLCKAARVCKQWRTASAHEDFWRILNFEDRHISVEQFEDICRSYPNATAISISGSSIYFLVMKAISSLRNLEVLTLGRGHIADSFFHALADCSMLKRLSINDAILGSGIQEISINHDRLCHLQLIKCRVMRIAVRCPQLETMSLKRSNMAQAVLNCPLLQELDVGSCHKLPDSAIRSAATSCPQLVSLDMSNCSCVSDETLREISLNCANLSFLDASYCPNVSLESVRLPMLTVLKLHSCEGITSASMAAISHSYMLEVLEFDNCSLLTSVSLDLPRLQNIRLVHCRKFADLNLMTIMLSSILVSNCPALHCINITSNSLQKLAIPKQDSLTTLALQCQSLQEVDLSECESLTNSVCNVFSDGGGCPMLKSLVLDNCESLTSVQFISTSLISLSLGGCRAITNLDLTCPNLEKVILDGCDHLERASFCPVGLSYLNLGICPKLNTLSIEAPSMVSLELKGCGVLSEALINCPLLISLDASFCSQLTDDFLSATTAKCPRIESLILMSCSSIGSKSLHSLYGLPNLTVLDLSYTFLVNLQPVFESCSNLEVLKLQACKYLTDTSLEPLYKGGALPALQELDLSYGTLCRSAIDELLSCCTNLTHVGLNGCVNMHDLNWGNSRGQIDYLPAANTPLGAISHENVRETSEQSTRLLQNLNCVGCPNIRKVVIPLRADCCHLSSLKLSLSANLKEVDVTCLNLSVLSLSNCSSLEILKLECPRLTSLSLQSCNIGEEAVEAAISKCTMLETLDVRCCPKISSMSMGRFRAICSRLKCIYSSMST* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1365 918 Gene3D Ribonuclease Inhibitor 760 917 IPR032675 -
Apr5g1365 918 Gene3D Ribonuclease Inhibitor 367 759 IPR032675 -
Apr5g1365 918 SUPERFAMILY RNI-like 144 410 - -
Apr5g1365 918 SMART LRR_CC_2 476 501 IPR006553 -
Apr5g1365 918 SMART LRR_CC_2 367 392 IPR006553 -
Apr5g1365 918 SMART LRR_CC_2 609 634 IPR006553 -
Apr5g1365 918 SMART LRR_CC_2 880 908 IPR006553 -
Apr5g1365 918 SMART LRR_CC_2 736 758 IPR006553 -
Apr5g1365 918 SMART LRR_CC_2 413 438 IPR006553 -
Apr5g1365 918 SMART LRR_CC_2 445 464 IPR006553 -
Apr5g1365 918 SMART LRR_CC_2 546 571 IPR006553 -
Apr5g1365 918 SMART LRR_CC_2 320 345 IPR006553 -
Apr5g1365 918 SMART LRR_CC_2 294 319 IPR006553 -
Apr5g1365 918 SMART LRR_CC_2 683 708 IPR006553 -
Apr5g1365 918 SMART LRR_CC_2 504 534 IPR006553 -
Apr5g1365 918 SMART LRR_CC_2 855 879 IPR006553 -
Apr5g1365 918 SMART LRR_CC_2 635 660 IPR006553 -
Apr5g1365 918 Pfam Leucine Rich repeat 855 875 IPR001611 GO:0005515
Apr5g1365 918 MobiDBLite consensus disorder prediction 98 113 - -
Apr5g1365 918 MobiDBLite consensus disorder prediction 92 113 - -
Apr5g1365 918 MobiDBLite consensus disorder prediction 1 74 - -
Apr5g1365 918 SUPERFAMILY RNI-like 469 702 - -
Apr5g1365 918 SUPERFAMILY F-box domain 122 153 IPR036047 GO:0005515
Apr5g1365 918 PANTHER OS10G0396666 PROTEIN 29 880 IPR044703 GO:0010252|GO:1905393
Apr5g1365 918 Gene3D Ribonuclease Inhibitor 116 366 IPR032675 -
Apr5g1365 918 MobiDBLite consensus disorder prediction 29 47 - -
Apr5g1365 918 PANTHER OS10G0396666 PROTEIN 29 880 - -
Apr5g1365 918 Pfam F-box-like 125 163 IPR001810 GO:0005515
Apr5g1365 918 SUPERFAMILY RNI-like 676 912 - -
Apr5g1365 918 SMART fbox_2 123 163 IPR001810 GO:0005515
Apr5g1365 918 MobiDBLite consensus disorder prediction 1 22 - -
Apr5g1365 918 ProSiteProfiles F-box domain profile. 117 163 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1365 Apr-Chr5 17863775 17869805 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1365 - - gmx:100786178 1456.43