Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1351 ATGAACTTATCCAAGAAAGAATCCCAAACGGATGCAAAGCTATTCAGCCCAAACAAGGCAACCACTCTGAATCCAAATGCAGCAGAGTTTGTTCCTTTTGCACTCAGATCATCATTACCAGGAACTACCAGCTCAGTAGATGCAACAGCAAGGCTTACTACTGCTGGAGCTCTTGGGAAAGCAGTTTTAGATAGATCAGAATCATCTGTTTCAAATAATTCTGATGATGAGGTGCACCAATACTGGCGATGTCAGCTCCCTGATGATATTACCCCTGATTTCAAGGTCATGGGAGAAGATGAGTCTCAAGGTCTTAATGATAATGACCTTTCTTTAGCGGGTTTATCCATACATGATGACAATGAAGCCTCAAGGTTTCCTGCTTCTAAAGGAAGTGGATATATAATAAATGAGCACGAGGAATTATCTCAACAGTATATTAATGGCAATAGCTTTGCTGATAAATTAAGGTTTTCCAATTCAAGCTACAGGGAGGACCCACCTTCGGCAAGCTTTTTGAATGCTTTGGCAAAGCCTTGGGATAGGTCAATTGGGAGTGGTGACCAGCATATCAGCAGTGGTCAAGAGGGACTTACTTATGATGAGAACTCTAGACATGGATTCTTAAATGATGTTTTGGGTGAAAATGCAATTGTGGATGATACTGATTTGAATCCTTTGGAGTTTTTGGCTTCTCTGTTCCCTGGTTTTGCAGCAGAAAGCCTTGCTGATGTTTACTTTGCCAATGGATGCGATTTACATCTGACCACTGAGATGCTTGCTCAGTTAGAGCTTCAAGTTGATGGTAGCTTCAGTCAGAATCTGAATTCAAAGACTCTATCGGCTTCCAATCTCAATACAATGGACTTCCCTGCACTTTCTTCACCAGATGGCCAGACTACTTCTGTAAAATATGCTATAGATAGTGTCCAACAAAGTGGCAATCCTTACCGATCATCTGATAGTGATATGCTGTTTTTCAAATCTAGCTCTTCAGTTCCATCTAGAGGTGCTACTGACTTTGCTTCAGCTGTTAGGAAGTTAGCTTCTCAAGATTCTGGTGGTATTTGGAAGTATGACAAAAATGGCTCTGGTGATGCTGCTATTGGCTCAAGTAGGAGGATTCCAAATGTTCTGGCCAGTGGCTACAATAATGGACAGGGAAGAGCCAACTTTGGTGATCGGTTACAGAACAGTGGTTCAGCCCGGGCAGCTCCTGTTTGGCTTGAAACCGGTGATGCAGTCGCAAATATGTACTCGGAGCTGCGGGAAGAGGCTCGTGATCATGCACGCTTACGTAATGCATATTTTGAGCAGGCACGGCAAGCCTATCTTATTGGCAATAAAGCCCTAGCAAAGGAACTAAGTGCTAAAGGACAACTGCACAACATGCATATGAAGGCAGCTCATGGAAAAGCCCAAGAATCCATTTACCGTCAGAGAAATCCGGTTGCTCCAGAGATGCAGGGCAATGGAAGAGGACATGAGAGGATGATAGACCTACATGGGTTGCATGCGAGTGAAGCCATTCGTGTGCTGAAACATGAGCTGAGTGTGCTAAAAAGCACGGCCATAGCTGCGGAGCAACGCTTGCAGGTTTATATTTGTGTTGGCACAGGTCATCATACCAGGGGTTCCCGCACTCCTGCAAGACTTCCAATTGCTGTACAGCGTTTTCTTCTCGAAGAGGGCCTTGACTTCACGGAACCTCAGCCAGGCCTTCTTCGTGTTGTGATATATTGA 1743 0.4429 MNLSKKESQTDAKLFSPNKATTLNPNAAEFVPFALRSSLPGTTSSVDATARLTTAGALGKAVLDRSESSVSNNSDDEVHQYWRCQLPDDITPDFKVMGEDESQGLNDNDLSLAGLSIHDDNEASRFPASKGSGYIINEHEELSQQYINGNSFADKLRFSNSSYREDPPSASFLNALAKPWDRSIGSGDQHISSGQEGLTYDENSRHGFLNDVLGENAIVDDTDLNPLEFLASLFPGFAAESLADVYFANGCDLHLTTEMLAQLELQVDGSFSQNLNSKTLSASNLNTMDFPALSSPDGQTTSVKYAIDSVQQSGNPYRSSDSDMLFFKSSSSVPSRGATDFASAVRKLASQDSGGIWKYDKNGSGDAAIGSSRRIPNVLASGYNNGQGRANFGDRLQNSGSARAAPVWLETGDAVANMYSELREEARDHARLRNAYFEQARQAYLIGNKALAKELSAKGQLHNMHMKAAHGKAQESIYRQRNPVAPEMQGNGRGHERMIDLHGLHASEAIRVLKHELSVLKSTAIAAEQRLQVYICVGTGHHTRGSRTPARLPIAVQRFLLEEGLDFTEPQPGLLRVVIY* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1351 580 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 580 - -
Apr5g1351 580 Pfam Domain of unknown function (DUF1771) 419 482 IPR013899 -
Apr5g1351 580 SMART DUF1771_2 418 483 IPR013899 -
Apr5g1351 580 SUPERFAMILY SMR domain-like 497 578 IPR036063 -
Apr5g1351 580 MobiDBLite consensus disorder prediction 1 21 - -
Apr5g1351 580 Gene3D - 466 579 IPR036063 -
Apr5g1351 580 CDD CUE_CID7_like 224 266 IPR041806 -
Apr5g1351 580 ProSiteProfiles Smr domain profile. 499 580 IPR002625 -
Apr5g1351 580 SMART SMR_2 496 580 IPR002625 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1351 Apr-Chr5 17755611 17760726 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1351 - - vun:114164614 979.548