Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1346 ATGATCATCAAATTGGGCGCTTCCAAAACAATCTATGCTGGAAGGAATGAAATCCAAACTACAGTTCTCAATTTCGTAATCGTCGCTGTGAGTAGAGGCATCGGAGGTGGTTTCGCGTACGATATCGACACCGTGAAACAGCGAATTAGGAGGAACGTTCTCCTTCCCAATGCCACCAAACGCGGTTGTTTCGCGTTTCGGTTTCTTCGATGGGCGTTGGTTATTGAAAGGAGCAAAGGCGTGAAAGCTCGTCGTCTGACGTTGCTTTGGGCTATGGCGGTGGAGGAGAGGTGGTGTTTGGTGACCGGAGGTCGAGGCTTCGCCGCTCGACATTTGGTGGAAATGCTAATTCGTGACAACATGTACTCCGTTCGTATCGCCGATTTGGGAGGCACAATTGATCTGGAACCCGCCGAACAGTTAGGGCTTCTCGGCCAGGCTTTGCACTCCGGGCGGGCCCAATATGTGTCTCTGGATCTTCGCAACAAGGCTCAAGTCTTAAAAGCATTGGAGGGAGTTGAGGTTGTGTTCCATATGGCTGCTCCCAACTCTTCCATTAACAACTATCAGCTTCATTATTCGGTGAATGTCGAAGGAACGAAGAATGTCATCGATGCTTGTGTGGAGATGAACGTGAAGCGTCTCGTTTACACTAGTTCTCCCAGCGTTGTCTTCGATGGAATCCACGGAATTCATAACGGGAATGAATCATTGCCGTATCCACCCTCGCTTAATGATCATTATTCTGCGACGAAAGCTGAGGGTGAGAAATTGGTTATTAAATCGAATGGGACTAATGGGCTCTTAACGTGCTGCATACGCCCCAGCAGCATTTTTGGGCCTGGTGATAGACTGTTGGTGCCTTCATTGGTCGATGCTGCCAGGGCAGGGAAATCCAAGTTCGTTATTGGCGATGGCAATAACATTTTTGATTTCACATATGTTGAAAATGTGGCTCATGCTCATATTTGTGCTGAACGAGCTCTAGCTTCAGAGGGATCGGTTTCAGAAAAAGCTGCAGGAGAGGCATATTTCATAACAAATATGGAACCTATGAAATTTTGGGAGTTCATGTCACTGATTTTGGAAGGTTTTGGATATGAAAGGCCAAAAGTGAAGATCCCTACCTTTGTTGCCATGCCAATTGCACATTTGATTGAGTGGATATTTAGGCTGTTAGGCCCTTATGGAATGAAGGTGCCTCAGTTGACCCCTTCAAGAATAAGAATCCTCACTTGCACGAGATCTTTTGATTGCTCAAAAGCAAAGGACCGCCTTGGTTATGCACCCATTGTAACACTACAGGAGGGCCTAAGGAGGACGGTTGAATCATACCCACACTTGAGGGCTGAAAATCAACCTAAAATTAAAAGAGAAGGTCCCTCAAAAGCTTCCATGTATCTTGGAAGTGGAAGAGTTGCTGACACATTACTTTGGAAGGATAAAAAGCAAACTTTCACCGTGTTGTTAGTCTTGATTGCAATATACTTCAACTTCATTGCATCTAAGGATACCATCATTACTGCTCTTACAAAGCTTCTATTGTTCACATCAATCTTTTTATTCATTCATGGCCTTCTACCTGCAAAAGTATTGGGGTATACTGTTGAGAAAATGCCCAAATCATGGTTTCACTTATCAGAAGATATGTCACATCAAATTGCTCTCTCAGTGGCCTCATCATGGAATTTTGTTGTGAATGTTTTAAAATCCGTTGCAGAAGGGAATAATTGGGAGCTGTTCTTTAAGGTTGTTTTCTCTCTGTTCATTCTTAGCTTCCTTGGAGCCTTTTCGCTTCAGAACTTGTATACTATAGGACTTACCCTTGCGTTTATAGCTTTCTACGTTTATGAAAGGAAGGAGGAAGACATTGATGGCATATTTATTAAAACTAGTTCTTTTGGATGCAAATTGAAATCCGATTTCACCAGTAAGTTTCTTGCTTCCAAGATTGATTGA 1959 0.437 MIIKLGASKTIYAGRNEIQTTVLNFVIVAVSRGIGGGFAYDIDTVKQRIRRNVLLPNATKRGCFAFRFLRWALVIERSKGVKARRLTLLWAMAVEERWCLVTGGRGFAARHLVEMLIRDNMYSVRIADLGGTIDLEPAEQLGLLGQALHSGRAQYVSLDLRNKAQVLKALEGVEVVFHMAAPNSSINNYQLHYSVNVEGTKNVIDACVEMNVKRLVYTSSPSVVFDGIHGIHNGNESLPYPPSLNDHYSATKAEGEKLVIKSNGTNGLLTCCIRPSSIFGPGDRLLVPSLVDAARAGKSKFVIGDGNNIFDFTYVENVAHAHICAERALASEGSVSEKAAGEAYFITNMEPMKFWEFMSLILEGFGYERPKVKIPTFVAMPIAHLIEWIFRLLGPYGMKVPQLTPSRIRILTCTRSFDCSKAKDRLGYAPIVTLQEGLRRTVESYPHLRAENQPKIKREGPSKASMYLGSGRVADTLLWKDKKQTFTVLLVLIAIYFNFIASKDTIITALTKLLLFTSIFLFIHGLLPAKVLGYTVEKMPKSWFHLSEDMSHQIALSVASSWNFVVNVLKSVAEGNNWELFFKVVFSLFILSFLGAFSLQNLYTIGLTLAFIAFYVYERKEEDIDGIFIKTSSFGCKLKSDFTSKFLASKID* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1346 652 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 98 445 IPR036291 -
Apr5g1346 652 Gene3D - 91 449 - -
Apr5g1346 652 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1 94 474 - -
Apr5g1346 652 ProSiteProfiles Reticulon domain profile. 473 625 IPR003388 -
Apr5g1346 652 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 100 374 IPR002225 GO:0003854|GO:0006694|GO:0016616
Apr5g1346 652 Pfam Reticulon 473 628 IPR003388 -
Apr5g1346 652 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 94 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1346 Apr-Chr5 17707098 17714508 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1346 93 445 Lipid Metabolism Gene Families AT2G33630 32.976 4.16e-46 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1346 K23558 - gmx:100816854 976.852