Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1340 ATGGAATGTAACGATCGGCATAGTCAAAGTGTAAGCTTGAAGAGAAAGTCACCAGAAAATAGAGATCATATACTCTTCAACAGTTTTTCTATGGATGACCTTAATCAAGATCTCTTTGAAAGGGTGCTTTCATGGTTACCAACTTCCACATTCTTTCGCCTAACTTCTGTGTGCAAAAGATGGAAATCAGTTGCTGCTTCTGCTAGTTTCAAGCTTGCTTGCTCTCACATTCCTTCAAGGGATCCTTGGTTTTTTATGGTTGCTCCCAACCTCAACCAATCTGTTATTTTTGACTCTGCTGAAGGTACTTGGAAAAGGCTAAATCACCCACCTTTTCTGCAAGAAGAATGTAACCATAGTTGCATGCCAGTTGCAGCTTCTGGGGGCTTGATTTGCTACCAAAAATTATCAGGAAACTTCATTGTAAGCAATCCTGTGACAGGATCTTGTCGACAACTCCCTCCACTGCATTTTACCTCAGAACATCAACCTCTCAATGCCATTGTGATGAGCACAACTTCCAAAGACCAATTCTCCTTCAAAGTTGTCCTAGTTGTTGGTGAACTTCCAAATCTCTTGTTTAAGGTCTACAATTCAAGTTCTGGCTGTTGGGAAGGTGAGATTGCACTGAGGAGAAAGGTTGAAGACCGTAATTCAGTGGAATATGATTCAACTGATGACAATGTTGTGTACTTCCTCAGCAAGGCTGGAATTGTGGTGGCAAGTAACATGCAGAGAAGCCCATCTAAGCAATATTCATCAGTTATCACTGACAAAGATGGTCAAGAGATTGTGTATTTTGTTAGCTCCTCAGGGAAAGTTGTTGCTTGCAATTTGACATGCAAGTGCTTCTTCGAGTATCCCAGGTTGTTGCCTGTTTTTAGTGAGTATTCCATTGATGTTGTGGAGTGTAATGGGGAGATGCTTGTTGTTTTGTTATCAGAATTCTTGGAAACTGCAAGTCTTAGGGTATGGAAATATGATGAGGCTAATAGATGTTGGCATCAGATTGCAGCAATGCCTGTAGCAAATTCTCATGAGTGGTATGGAAAGAAAGCAGATATTAACTGTGTTGGAGCTGGTAACCATATCTTTATATGTTTGAACTCCTCTGAGCTATGTACTTATATTATGTGTGATTTGGAGACCAACAAATGGGTTGAATTGCCAAACTGTTGCATAAATGGCCAAGTCATGGACTTCATGTCTGCCTTTTCATTTGAGCCTAGGATAGAGGCTTCTGTGTGA 1248 0.4071 MECNDRHSQSVSLKRKSPENRDHILFNSFSMDDLNQDLFERVLSWLPTSTFFRLTSVCKRWKSVAASASFKLACSHIPSRDPWFFMVAPNLNQSVIFDSAEGTWKRLNHPPFLQEECNHSCMPVAASGGLICYQKLSGNFIVSNPVTGSCRQLPPLHFTSEHQPLNAIVMSTTSKDQFSFKVVLVVGELPNLLFKVYNSSSGCWEGEIALRRKVEDRNSVEYDSTDDNVVYFLSKAGIVVASNMQRSPSKQYSSVITDKDGQEIVYFVSSSGKVVACNLTCKCFFEYPRLLPVFSEYSIDVVECNGEMLVVLLSEFLETASLRVWKYDEANRCWHQIAAMPVANSHEWYGKKADINCVGAGNHIFICLNSSELCTYIMCDLETNKWVELPNCCINGQVMDFMSAFSFEPRIEASV* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1340 415 ProSiteProfiles F-box domain profile. 28 73 IPR001810 GO:0005515
Apr5g1340 415 SUPERFAMILY F-box domain 25 86 IPR036047 GO:0005515
Apr5g1340 415 Pfam F-box domain 32 66 IPR001810 GO:0005515
Apr5g1340 415 PANTHER F-BOX PROTEIN FAMILY, ATFBX13-LIKE PROTEIN 24 415 - -
Apr5g1340 415 SMART fbox_2 34 74 IPR001810 GO:0005515
Apr5g1340 415 SUPERFAMILY Galactose oxidase, central domain 94 393 IPR011043 -
Apr5g1340 415 Gene3D - 26 71 - -
Apr5g1340 415 PANTHER F-BOX/KELCH-REPEAT PROTEIN 24 415 - -
Apr5g1340 415 Gene3D - 86 403 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1340 Apr-Chr5 17649700 17650998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1340 - - gmx:100786481 744.577