Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1327 ATGGCGTTGGTTAATCCATTTCTCTCCCCCACTCGAACTTCACTGCCGTTGCGCATTTCCATTCCCCCATCAAACCAACTACTACGTTGGACTCTGTGTTCTGTGTCATCATCAACAACAAGAACGAAACACTTGAGGTGTGGTGCCACTGCAGATATCAAAACAGCACCTTTAATTGACGGGGAAGAAGATGGGAAGGTTCTTGTGGGTCCTACCAGCGAGGAGAGTGTGGTTGCAGACTATGACTGGACACAGGAATGGTACCCTCTGTACCTCACTAAGAATGTGCCCCAAGATGCACCCCTCGCTCTCACTGTCTTTCACAAGCAACTCGTGTTGTTTAGGGATGCCAATGCCATCTTTCGATGTTACGAAGATCGCTGCCCCCACAGGTTAGCGAAACTATCAGAGGGCCAGTTGATTGATGGAAGGCTTGAGTGCCTGTACCATGGATGGCAATTTGAAGGGGAGGGCAAATGTGTGAAGATACCTCAGCTTCCTGCTGATGCAAAAATCCCTCGGTCTGCATGTGTAAGAACATATGAAGTGAGGGACTCTCAAGGTGTTATTTGGGTGTGGATGTCCCTAAAGACACCTCCAAATGTCAATAAAATACCTTGGTTTGAGAACTTTGCAAGGCCAGGGTTTCAAGATATTTCAACAATTCATGAACTCCCATACGATCACTCTATTCTTCTGGAGAACCTGATGGATCCTGCCCATGTGCCAATCTCACATGATAGAACAGATTGGACTGCAAAAAGAGAGGATGCGCAGCCGCTATGTTTTGAGGTGACCGAAAGAACTGATAGAGGGTTTGCAGGCTGGTGGGGCAGGGAGAAAGATGGCTCTATGCTTAACTTCTTAAGATTTGAGGCTCCTTGTGTTCTACAAAACAATAGGGAAATTGTTGATAAAAATGGTGAAAAAAACTACTTCAGTGGTCTGTTTCTTTGTAGACCAACTGGACAAGGGAAATCCATGGTGATAGTGAGGTTTGGATCAACAAAAAGATCTCCACTAGTAAAGCTGTTTCCTGAATGGTACTTCCATCAGAATGCAGGGAAGGTATTTGAGCAAGACATGGGATTCTTATCATCCCAAAATGAAACTCTTTTGAGAGAGAAAGCTCCAACAAAGGAACTATACCTGAATCTAAAATCATCAGACACATGGGTTGCTGAATACAGGAAGTGGGTGGACAAAGTGGGGCATGGGATGCCATATCATTTTGGTCATAGCACTATTTCCTTACCCAAAGAGCCTGCTGTGGTCGAACATGCTCCTGCTGGACTCATTGCAGGATTATCCGCTTCCTCACCTGCCAAAGGGGGCATTGGAACAATGCATGCCCCTAATTTAGCCAATAGATATTTTAGGCATGTAATACATTGCAAAGAATGTAGTACTGTGGTAAAGGCTTTCCAAAGTTGGAAAAATGCCCTTTCAGCTGTGGCTGTTGCATTGGCTGCATTGGCTATTCTGGTATCTGGTAGACAGTGGAAATTACTCCTACTGGTATCTGCGTCTCTATGCTCTGTTGGAGTCTATGCTTGCTCAACAGCAATTGCAATGAACACAACAAATTTTATCAGGACACATAGGAGATTGTGA 1614 0.4486 MALVNPFLSPTRTSLPLRISIPPSNQLLRWTLCSVSSSTTRTKHLRCGATADIKTAPLIDGEEDGKVLVGPTSEESVVADYDWTQEWYPLYLTKNVPQDAPLALTVFHKQLVLFRDANAIFRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVRDSQGVIWVWMSLKTPPNVNKIPWFENFARPGFQDISTIHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQPLCFEVTERTDRGFAGWWGREKDGSMLNFLRFEAPCVLQNNREIVDKNGEKNYFSGLFLCRPTGQGKSMVIVRFGSTKRSPLVKLFPEWYFHQNAGKVFEQDMGFLSSQNETLLREKAPTKELYLNLKSSDTWVAEYRKWVDKVGHGMPYHFGHSTISLPKEPAVVEHAPAGLIAGLSASSPAKGGIGTMHAPNLANRYFRHVIHCKECSTVVKAFQSWKNALSAVAVALAALAILVSGRQWKLLLLVSASLCSVGVYACSTAIAMNTTNFIRTHRRL* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1327 537 Pfam Rieske [2Fe-2S] domain 86 167 IPR017941 GO:0051537
Apr5g1327 537 PANTHER PROTEIN TIC 55, CHLOROPLASTIC 61 537 - -
Apr5g1327 537 Gene3D - 214 405 - -
Apr5g1327 537 Gene3D - 82 211 IPR036922 GO:0051537
Apr5g1327 537 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 87 192 IPR017941 GO:0051537
Apr5g1327 537 SUPERFAMILY Bet v1-like 188 406 - -
Apr5g1327 537 SUPERFAMILY ISP domain 80 199 IPR036922 GO:0051537
Apr5g1327 537 Pfam Pheophorbide a oxygenase 291 376 IPR013626 GO:0010277
Apr5g1327 537 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 61 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1327 Apr-Chr5 17546528 17548654 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1327 - - gmx:100818625 965.296