Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1323 ATGAGTAACCAAAGTGCTTCTTCAAGCAATGGCAATGATCGTTCAAGGATGTATTGGACTCCATTGATGGAACGCTATTTCATTGACCTAATGTTAGAGCATTTGCAAAAGGGGAATAGGGTTGGCCACACTTTTAACAAGCAAGCTTGGACACACATGCTCACTACTTTCAATGCCATGTTTGGTTCTCAATATGACAAAGATGTCTTGAAAACTCGTTATACCAATTTGTGGAAGCAGTTTAATGATGTCAAGACGCTTCTTTCTCAGTTTGGTTTTTCTTGGGATGCTGCACGCCAAATGGTTGTGGCTAATGATCTTGTTTGGGATGCTTATGTCAAGTCTCACCCTGATGTTAGATGCTACAGAACAAAACCAGTGCTCAATTTTGATGATTTGTGCATGATATATGGTTACACTGTTGCTGATGGAAGATATAGTTTATCAAGCCATGATGTAAGCCTTCATGATCATGTGCTGGGTGATGGAATAGGAAGCATTGCTGTGTCGAGTAATGAGCGTCCCAGGACAGATTGGACTGCATCAATGGACCAATTTTTTATAGAGCTTTTGCTTGATCAGTTGGGTAGAGGCAATAAAATGGATAGTGGATTCAATAAAAACGCTTGGACTGATATGCTAACCATGTTTAACGCCAAGTTTGGATGTCAACATGGTAAAAGGGTTTTAAAGAATCGGTTCAAGAAACTGTTGAAATGTTATTGTGATGTAACAAAACTTCTAAGACAAGGCTTTTTGTGGAATGAACAACAACAAATGCTTTCAGCTGACGATGACGTTTGGAATGCTTATGTCAAGGCTCATCCACATGCAAAAACATATAGATCAAGAATTTTACCAAATTATCGGGATTTAGAGTTAATATTCGGAAATGTGTCTGAAGATGAGATAAGTAATTTGCATCAGGAGAAAAATCATGAAGATGTCATGTCAGAAACAAATGCTGTTGAAGGAAAAGGAAATCGCAATCCAAGCAGTACCGATCGTACTAGAACATATTGGACACCTCCAATGGATCGTTGCCTCATTGACTTGTTGTTAGAGCAGGTCAAACGTGGAAATAGACTAGGGCAGACATTCATTACCCAGGCTTGGAATGATATGGCTACCTCTTTCAATGAACGATTCAAATCTCATTATGACGAAGATGTACTAAAGAATCGTTACAAACATTTGAGGAAACAGTTCAATGATGTAGACCAGCTTCTTCGGCAAGGTGGATTTTCATGGGATGATTCAAGAGAAATGGTTGATGCTGAGGATCACGTTTGGGATGCTTATACAAAGGCACATCCTGAAGCTCGATCACTTAGAGTTAAAACCTTGCCAGGCTATTGCAAATTGTGTGTTATATTTGGAGAGGAAAGTCCTGATACCAGATACTTCCGTTTATCTCATAATGCAGATCCCAATAGTGAATCCCCGGAGTTGATAACAGGTGAACAAAAGAATGGCATTCTTCCAAATGTGGCTGGTTCTACAGTAGAGTGGACAGAATCGATGGAATGCTGTTTTGTTGACCTTATGATTGAGCAAATAAATAGAGGAAATAGGATTGGGAGTTTATTCAATGAGGAAGCTTGGACTCACATGATCAAAGCTTTTAGTACTAGACAGGGACTCCAATGTGATAAGCAGTTTCTGATGGATCGATATTTCTGCTTGATGAAAAAACATGATGACATCAGCAGTATACTCGGTCATAGTGAATTTTCATGGGATGAAAACCTACAAACAATAGTTGCTGAGAATGAAATTTGGGATGCATACATTAAGGATCACCCTGATGCCATCTCGTATAAAAACATATGCTTATATGTTTTCCATGATTTGTGCAAGATTTTCGGAAACAAAGTAATGAGAGTATCTGATGCAAGGGTGAATGCTCTGGAACAGTTTCAGTTAATGGAAGCAAACGATATCACCATTGAAATGGACATGGACGGAACATCTGGAAACTTGATTGTGATTAGCAACGTTGATATATCAGACCAGAATACAAACAAGGCAAGGGAAATGGATACAGATGGCTCATATGGGAATTTGGTTGTGAGTGGCACTAATGAAATATCCTACCAAGATCAGAAAAGGCGGAGTGAAATTGACATGGTTGCTGTTGGAACATCTGGAAATTTAGATGTGACTAGCAACAATGAAATATCAAACCAAGATACAGAAAGGCCAAGGGAAATGGATATGGATATAAAATGTGGTGATTCGGGCGTGACTTGCAACACTCGAACAATATCTCAAAATAAAGAAAGGCCTAACAAAATGGATACAAATGGAACATGTGGCAATTTGGTAATGAGTGGCAACACTAAAACAGCAACACACCATGTTAAAAGAAGGCCTAATACAATGCCACTAGACTCCAGACCCCCCAAAAAGGAGCTGAGAATGAAAGAAGCTCTGACTGAGATGGCTAGTGCTGTCAAGGCTCTGATGAACAAGAAAGATAGAAACACAAATACATCGTTTGAAAATGCTTTAAGTGCACTTCAGGCCATGCCTGACATAGATGAGGAGCTTGTAATGGATGCGTGTGATTTGTTGGAAGATGAGAGGAAGGCCAAGATATTTTTGGCCTTGGATATCTCTTTGCGAAAGAAGTGGTTGCTTAGAAAGCTTCGTCAACAAAAGCCACATGACTCAACTGTATACTAG 2688 0.3936 MSNQSASSSNGNDRSRMYWTPLMERYFIDLMLEHLQKGNRVGHTFNKQAWTHMLTTFNAMFGSQYDKDVLKTRYTNLWKQFNDVKTLLSQFGFSWDAARQMVVANDLVWDAYVKSHPDVRCYRTKPVLNFDDLCMIYGYTVADGRYSLSSHDVSLHDHVLGDGIGSIAVSSNERPRTDWTASMDQFFIELLLDQLGRGNKMDSGFNKNAWTDMLTMFNAKFGCQHGKRVLKNRFKKLLKCYCDVTKLLRQGFLWNEQQQMLSADDDVWNAYVKAHPHAKTYRSRILPNYRDLELIFGNVSEDEISNLHQEKNHEDVMSETNAVEGKGNRNPSSTDRTRTYWTPPMDRCLIDLLLEQVKRGNRLGQTFITQAWNDMATSFNERFKSHYDEDVLKNRYKHLRKQFNDVDQLLRQGGFSWDDSREMVDAEDHVWDAYTKAHPEARSLRVKTLPGYCKLCVIFGEESPDTRYFRLSHNADPNSESPELITGEQKNGILPNVAGSTVEWTESMECCFVDLMIEQINRGNRIGSLFNEEAWTHMIKAFSTRQGLQCDKQFLMDRYFCLMKKHDDISSILGHSEFSWDENLQTIVAENEIWDAYIKDHPDAISYKNICLYVFHDLCKIFGNKVMRVSDARVNALEQFQLMEANDITIEMDMDGTSGNLIVISNVDISDQNTNKAREMDTDGSYGNLVVSGTNEISYQDQKRRSEIDMVAVGTSGNLDVTSNNEISNQDTERPREMDMDIKCGDSGVTCNTRTISQNKERPNKMDTNGTCGNLVMSGNTKTATHHVKRRPNTMPLDSRPPKKELRMKEALTEMASAVKALMNKKDRNTNTSFENALSALQAMPDIDEELVMDACDLLEDERKAKIFLALDISLRKKWLLRKLRQQKPHDSTVY* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1323 895 MobiDBLite consensus disorder prediction 717 745 - -
Apr5g1323 895 Pfam Myb/SANT-like DNA-binding domain 179 271 IPR024752 -
Apr5g1323 895 Pfam Myb/SANT-like DNA-binding domain 18 112 IPR024752 -
Apr5g1323 895 Pfam Myb/SANT-like DNA-binding domain 340 434 IPR024752 -
Apr5g1323 895 Pfam Myb/SANT-like DNA-binding domain 503 597 IPR024752 -
Apr5g1323 895 MobiDBLite consensus disorder prediction 323 338 - -
Apr5g1323 895 MobiDBLite consensus disorder prediction 314 338 - -
Apr5g1323 895 PANTHER EXPRESSED PROTEIN 496 625 - -
Apr5g1323 895 PANTHER EXPRESSED PROTEIN 168 303 - -
Apr5g1323 895 PANTHER EXPRESSED PROTEIN 9 160 - -
Apr5g1323 895 PANTHER EXPRESSED PROTEIN 766 886 - -
Apr5g1323 895 PANTHER EXPRESSED PROTEIN 319 478 - -
Apr5g1323 895 MobiDBLite consensus disorder prediction 760 783 - -
Apr5g1323 895 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 496 625 - -
Apr5g1323 895 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 168 303 - -
Apr5g1323 895 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 766 886 - -
Apr5g1323 895 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 9 160 - -
Apr5g1323 895 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 319 478 - -
Apr5g1323 895 MobiDBLite consensus disorder prediction 760 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1323 Apr-Chr5 17528225 17533176 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1323 - - aprc:113865140 1835.46