Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1317 ATGGCGTTTTGGAGATCTCTCGCGTTCTCTGCGGTTCTTCTGCTTCTCATCCATAGCGTTCACTGCTTCTACCTCCCTGGCGTCGCTCCTCAGGACTTCCAGAAGGGAGATACATTGCAAGTGAAAGTAAATAAATTAACATCAACAAAGACCCAGCTACCGTATACATATTATTCACTTCCTTATTGTGCCCCACCAAAAATACAGGATAGTGCAGAAAACCTTGGGGAAGTGCTTCGTGGTGACCGCATTGAAAATTCTCTCTATGTGTTTAAAATGCGTGAGCCACAAATGTGCAATATTGTGTGTCATCTTAACCTTGATGCTAAAACTGCTAAGGAGTTCAAAGAGAAGATCGGTGATGAGTATCGGGTGAACATGATCCTTGACAACCTTCCTCTAGTTGTTCCCATAAAACGGAATGAACAGGATTCGACTGTTTATCAGCTTGGTTTCCATGTTGGACTCAAAGGACAGTATAGTGGGAGCAAGGAAGAGAAGTTTTTTATTCACAACCATTTGGCTTTTACTGTCAAGTATCATAAAGATTTGCTAACTGAATCTGCCAGAATTGTGGGCTTTGAGGTTACACCATTCAGTGTTAGACATCAATATGAAGGTAAGTGGGATGGAAAAACAACTCGTTTGACAACCTGTGACCCTCATGCTAAACACACAGTTGTCAACTCCAACACTCCCCAAGAGGTTGAAGAGAACAAGGAAATTATCTTCACATATGATGTTGAATTCCAGGAGAGTGACGTCAAGTGGGCTTCAAGATGGGATGCCTATTTGCTAATGAATGATGACCAAATCCACTGGTTTTCAATCGTTAACTCATTAATGATTGTTCTCTTCCTTTCCGGCATGGTGGCAATGATAATGTTGCGGACACTCTACCGTGACATTGCAAAGTACAATGAGCTTGAGACCCAGGAAGAAGCCCAAGAGGAGACAGGTTGGAAGCTTGTCCATGGTGATGTATTTAGGCCCCCCAACAACTCAGATTTGCTGTGTATTTATGTTGGAACTGGGGTTCAATTTTCTGGGATGATACTAGTCACCATGATATTTGCGGTCCTTGGGTTCCTCTCTCCTTCAAACCGAGGTGGGCTGATGACAGCCATGCTCTTGCTTTGGGTTTTCATGGGAATTTTTGCTGGGTACGCGTCAACTCGCTTGTACAAAATGTTCAAAGGATCGGAATGGAAAAAAATTGCTCTCAGGACTGCAACTGTGTTCCCTGCAGTTGTCTCTGCCATTTTCTTTGTATTAAATGCTCTCATATGGGGTGAAAAATCATCTGGAGCTGTGCCGTTTGGTACAATGTTTGCTCTGATCTTTTTATGGTTTGGAATCTCGGTTCCACTTGTTTTTGTGGGTAGCTATGTTGGATTCAAGAAGCCTGCAATTGAGAATCCAGTGAAGACGAACAAAATCCCAAGGCAGATCCCTGAGCAGGCTTGGTACATGAACCCAGTTTTCTCAGTTCTGATTGGCGGAATACTCCCCTTTGGAGCTGTTTTCATTGAACTTTTCTTCATCCTCACGTCCATTTGGTTGAATCAGTTTTACTACATCTTTGGTTTCCTCTTTTTGGTCTTCATCATCCTCATTGTCACTTGTGCCGAAATAACCATTGTGCTCTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGGTCATACCTTACCTCTGGTTCCTCTGCCCTTTACCTCTTTCTTTATGCTACTTTCTACTTCTTCACCAAGCTTGAAATCACAAAGTTGGTATCTGCGATATTATACTTTGGGTACATGCTTATAGCTTCTTATGCATTTTTTGTGGTAACCGGTACCATCGGATTTTATGCATGCTTTTGGTTCACAAGGCTCATCTACTCCTCAGTCAAAATTGATTAG 1911 0.427 MAFWRSLAFSAVLLLLIHSVHCFYLPGVAPQDFQKGDTLQVKVNKLTSTKTQLPYTYYSLPYCAPPKIQDSAENLGEVLRGDRIENSLYVFKMREPQMCNIVCHLNLDAKTAKEFKEKIGDEYRVNMILDNLPLVVPIKRNEQDSTVYQLGFHVGLKGQYSGSKEEKFFIHNHLAFTVKYHKDLLTESARIVGFEVTPFSVRHQYEGKWDGKTTRLTTCDPHAKHTVVNSNTPQEVEENKEIIFTYDVEFQESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDIAKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCIYVGTGVQFSGMILVTMIFAVLGFLSPSNRGGLMTAMLLLWVFMGIFAGYASTRLYKMFKGSEWKKIALRTATVFPAVVSAIFFVLNALIWGEKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSAILYFGYMLIASYAFFVVTGTIGFYACFWFTRLIYSSVKID* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1317 636 Pfam Endomembrane protein 70 54 592 IPR004240 GO:0016021
Apr5g1317 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 5 636 IPR004240 GO:0016021
Apr5g1317 636 SUPERFAMILY MFS general substrate transporter 276 459 IPR036259 -
Apr5g1317 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 5 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1317 Apr-Chr5 17496623 17501092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1317 8 636 Miscellaneous Gene Families AT5G10840 84.628 0.0 1093
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1317 K17086 - gmx:100780976 1205.66