Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1313 ATGGTGAAAGCAAAGTCCAAGAATGAATATACACTAGATTCAGCGAGAGCATCTTTGGTTAGACAAGAAGACACCATCATATTTGGTTTGATTGAGAGAGCAAGGTTCCCAATAAATTCTCCCACCTACCATCAAAATTACACTTCCATTCCCCACTTTAATGCCTCATTGCTTGACTTCCTTGTTCAGAATAATGAGGCCATTCAAGCTAAGGCAGGTAGATACATTAATCCTGAAGAAAATCCTTTCTTCCCAGATAATTTACCACCCTCGATGGTGCCACATTATAACTTCTCACAGTTTTTGCAGCCTGTAGGAGCTTTGATTAACATAAACAAGTCTATTTGGAAAATGTATTTTGATGAGCTGCTTCCAATGTTTGTAGCTTCCAGTGATGATGGCAACTATGCACAAACTGCAGCTAGTGATCTTGCATTATTGCAGGCCATCTCTAGAAGAATTCATTACGGAAAGTTTGTAGCTGAGGCGAAATTCAGGGCATCTCCTAAAGATTATGAGCCTTTAATTCGTGCTCGGGATAGAAAGGCATTGACGAAATTGTTGACATCTGAAAGCGTTGAAAAGATGGTGGTGAAGAGGGTTGAGAAGAAGGCCATGGTGTTTGGTCAAGAAGTGAGTCTTGATCGTGATGTAGAGAGTAACAAATACAAGGTTGATCCATCAGTAGCTTCTGGCTTGTACCAGAAATGGATAATACCCCTCACTAAAAATGTTGAAGTCGAGTACTTACTACGTCGCCTCCATTGA 768 0.4049 MVKAKSKNEYTLDSARASLVRQEDTIIFGLIERARFPINSPTYHQNYTSIPHFNASLLDFLVQNNEAIQAKAGRYINPEENPFFPDNLPPSMVPHYNFSQFLQPVGALININKSIWKMYFDELLPMFVASSDDGNYAQTAASDLALLQAISRRIHYGKFVAEAKFRASPKDYEPLIRARDRKALTKLLTSESVEKMVVKRVEKKAMVFGQEVSLDRDVESNKYKVDPSVASGLYQKWIIPLTKNVEVEYLLRRLH* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1313 255 PIRSF Chor_mut_AroQ_eu 1 255 IPR008238 GO:0004106|GO:0009073
Apr5g1313 255 TIGRFAM CM_pl-yst: chorismate mutase 11 254 IPR008238 GO:0004106|GO:0009073
Apr5g1313 255 SUPERFAMILY Chorismate mutase II 5 254 IPR036263 GO:0046417
Apr5g1313 255 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 3 255 IPR037039 GO:0004106|GO:0009073
Apr5g1313 255 ProSiteProfiles Chorismate mutase domain profile. 3 255 IPR008238 GO:0004106|GO:0009073
Apr5g1313 255 PANTHER CHORISMATE MUTASE 4 254 - -
Apr5g1313 255 PANTHER CHORISMATE MUTASE 4 254 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1313 Apr-Chr5 17473437 17475159 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1313 K01850 - gmx:100791095 401.749