Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1307 ATGGCAACTGTCGATAGAGAATTGGAAGAAGAGCTTCTTGATGCCGGTAACAAGCTCGTAGATCCTCCGTCGTCGGTGGAGGAGCTTCTCTCACTGCTAGACCAAGTTGAGAATTGCCTATCAAGGGTTGAACAATCACCTACCAACTCTATGCAAAATGCACTCTCTCCATCATTGAAAGCATTGATTGCAGATAAACTTTTAAAGCATTCAGATGGTAATGTCAAAGTTGCAGTTGCTTCTTGCATCAGTGAAATAACAAGAATCACTGCGCCTGATGCTCCTTATGAGGATGATCAAATGAAGGAAGTCTTTCAATTAATAGTGTCTTCATTTGAAAATCTACATGATAAGTTAAGCCGATCTTATAGAAAGATAACATCAATTCTTGAAACTACCGCAAAAGTAAGATCTTGTGTCGTAATGCTGGACCTTGAATGTGATGCCCTGATTTTGGAGATGTTTCAGCATTTCTTGAAGGCAACAAGAGAGCATCATCCCGAAAATGTTTTTTCATCCATGGAAACAATTATGGCCCTTGTTCTAGAGGAAAGTGAAGATATATCTTTAGATCTGCTTTCTCCACTCCTGGCCAGCATTAAGAAAGACAATGAGGAAGTTTCTTTGATTGCCCGAAAATTGGTAGAGAGGGTACTTGAAAGTTGTGCAACCAAGCTTAAACCCTACTTGATTCAAGCAGTGAAAATCTTGAGTATATCTTTGGATGATTATAGTGTGGTACTTGCTTCAATATGCCAAGATACATCTGATGGCTTGGAGAAAAATGATGCATGGTTTACTAGTGAGCATGTGGAAGATAAGAATATGTCAAAAAAACAATCACTGGAGGAGTCAGCACAGGTGGTTGAAAAAGATTCAAGGGAAGCTACATCTTCTGAACAAGATAATCCTGATGCAAACAGATCCCCCAAGTCAGTTATGAGCAATGGTGTTGCATGTGTTGGAGAAGATTATGATTTAGGTGATTCCAAGTCCACTAAAAAGCAAGAGGATGTTGATTGTTCTAATCATTCTGAAGGTTTGAATACATCTTGTCATGGGGTGCCCAATGATATGGACACTGAAAAAGTTGACAATCGTCAACAAAAGCCAGAACAAGACACGAAGAGGCGAGGAAGGAAATCAAGCTCTTCAACTAAATCAGCAAAACCTTCTAGGGCTCATGTTGCTACTAATGAAAATGAAGCTGATAAAATGATGGACTCTGAAAGCCACAGCAAGGAAGTTCCCAGTTCTGCTCATGTGGACTATTCTGTTGAAGCACCTGGACCTTCAGAGAATGACAAAGAGATTGATGCTAAAATTTCATCACAAAAAGCATGTGACAATGAATCTGAAGTTGCTTCTCCTTCACCCGTGGAGAGCCTCCATGATGAAAATCATGCAAAGAAACATGGACGAGCAAAAATTAAAGACGGCCCTTCAAAAGAAGTGGCTGCAGAGAATGTTTCAAAAAAGGTGTCTGAAGGAGCTAGTGATTCAGAAGCCAAACCTGCCAGAAAGTCAGTGAAAAGGGCACTTGGTCTGAACTCTGATGTGAAAAAAACTACTGCAGCAGATTCAGTAAAGAAAGGAAGTGGAGCTGCAATTGGTGCCAATGCTAAGAAGCACTCAGGCAATAAATTAGATGAAAACAAAAAGGGTGGTGGCGGCGGATCCTCTTCAAGGCAGATAGAAAACAAGAAAAAAGGGGGGCGAGGGAAGGCAAACTCTGAAACAGATGTAGCAAAATCTTCTGCCATAGATGTGGACAAGGAAATGGTGTCTTCTCCAAGGTCTGGTACAAAGTTGACTAAAGATGAAAATTCAGAGACTCCCAAGACAAATGTGAAAAGGAAACGCACTTTAGGAAAAGAAAATGAGTCTGATATGAAAGAGTATGGGGAAAACCTTGTTGGTTTACGGATCAAAGTTTGGTGGCCTAAGGATCGTGAGTTTTACAAAGGTGTCGTTGATTCTTTTGATTCTGCCAAAAAGAAGCACAAGGTCTTCTATGATGATGGTGATAAAGAAGTATTAAATCTTGTGAAGGAAAAATGGAAGTTCATTAAAGCTGACTTGGATGCAGATGAGGAAGAAGGAAGTAACCGTGCAAGTCTTGATCCTTCCACTGATATGCCGCCTAAGAAGAAGGGAAAAACAAGTGCTGGAGAATCAACCAAGCAAGGAAAGATGGATGCTTCTTCCAGAAGTGGTGGAGCAGTAGCATCCAGTAGGTCAAAGGGTGTCTCCATGAAGTCTACCCACAAGTCCAAAGATGGCAACAAATCCAAAGATTCTAAGACTACTAGCAAATCTGAGGATGAAGCTACTCGAAGATCTAAGGACGGAACTCCTAAAAGTGGTAACAGTAAATCTACTGTTGCTGCTAAAAAAGTGAGGGGCAAGTCCAATACTTCCAAGGCGAGCAAATCAAAGGATGAGATTAGTACTCCAAAACACTCTGCCAAGTCTAAGCAAGTGACTCCAAAAAATGGAAAATCCAAGCAAGAAACCCCAAAGACTGCTACTTCCAAGGGAAAACCTCCCAAAAGTGGTGGAAAGTCTGATATTAACGGTACTGGCAAGGTGAAATCTGGTTTATTGAAAAGAAAAGATTCCGAGAATGAGAACTCAGATGTTTCAGCAAGAGAAGTAGATAAGGGCAAGACTTCAAGTTCATTGAAGGCACAAGGAAGTGAGGCCAAGAGTGGAAAGAAGCGTAAGAGAAGCTAG 2736 0.4094 MATVDRELEEELLDAGNKLVDPPSSVEELLSLLDQVENCLSRVEQSPTNSMQNALSPSLKALIADKLLKHSDGNVKVAVASCISEITRITAPDAPYEDDQMKEVFQLIVSSFENLHDKLSRSYRKITSILETTAKVRSCVVMLDLECDALILEMFQHFLKATREHHPENVFSSMETIMALVLEESEDISLDLLSPLLASIKKDNEEVSLIARKLVERVLESCATKLKPYLIQAVKILSISLDDYSVVLASICQDTSDGLEKNDAWFTSEHVEDKNMSKKQSLEESAQVVEKDSREATSSEQDNPDANRSPKSVMSNGVACVGEDYDLGDSKSTKKQEDVDCSNHSEGLNTSCHGVPNDMDTEKVDNRQQKPEQDTKRRGRKSSSSTKSAKPSRAHVATNENEADKMMDSESHSKEVPSSAHVDYSVEAPGPSENDKEIDAKISSQKACDNESEVASPSPVESLHDENHAKKHGRAKIKDGPSKEVAAENVSKKVSEGASDSEAKPARKSVKRALGLNSDVKKTTAADSVKKGSGAAIGANAKKHSGNKLDENKKGGGGGSSSRQIENKKKGGRGKANSETDVAKSSAIDVDKEMVSSPRSGTKLTKDENSETPKTNVKRKRTLGKENESDMKEYGENLVGLRIKVWWPKDREFYKGVVDSFDSAKKKHKVFYDDGDKEVLNLVKEKWKFIKADLDADEEEGSNRASLDPSTDMPPKKKGKTSAGESTKQGKMDASSRSGGAVASSRSKGVSMKSTHKSKDGNKSKDSKTTSKSEDEATRRSKDGTPKSGNSKSTVAAKKVRGKSNTSKASKSKDEISTPKHSAKSKQVTPKNGKSKQETPKTATSKGKPPKSGGKSDINGTGKVKSGLLKRKDSENENSDVSAREVDKGKTSSSLKAQGSEAKSGKKRKRS* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1307 911 MobiDBLite consensus disorder prediction 430 446 - -
Apr5g1307 911 PANTHER TRANSCRIPTIONAL REGULATOR 5 880 - -
Apr5g1307 911 MobiDBLite consensus disorder prediction 327 342 - -
Apr5g1307 911 Pfam Sister chromatid cohesion protein PDS5 protein 27 232 - -
Apr5g1307 911 MobiDBLite consensus disorder prediction 787 803 - -
Apr5g1307 911 SUPERFAMILY ARM repeat 40 246 IPR016024 -
Apr5g1307 911 MobiDBLite consensus disorder prediction 693 724 - -
Apr5g1307 911 MobiDBLite consensus disorder prediction 725 751 - -
Apr5g1307 911 MobiDBLite consensus disorder prediction 693 911 - -
Apr5g1307 911 MobiDBLite consensus disorder prediction 358 381 - -
Apr5g1307 911 MobiDBLite consensus disorder prediction 822 846 - -
Apr5g1307 911 MobiDBLite consensus disorder prediction 753 786 - -
Apr5g1307 911 MobiDBLite consensus disorder prediction 271 301 - -
Apr5g1307 911 MobiDBLite consensus disorder prediction 463 509 - -
Apr5g1307 911 SMART TUDOR_7 635 693 IPR002999 -
Apr5g1307 911 MobiDBLite consensus disorder prediction 397 417 - -
Apr5g1307 911 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 5 880 IPR039776 GO:0007064
Apr5g1307 911 Gene3D - 635 683 - -
Apr5g1307 911 MobiDBLite consensus disorder prediction 866 891 - -
Apr5g1307 911 CDD TUDOR 640 682 IPR002999 -
Apr5g1307 911 MobiDBLite consensus disorder prediction 271 629 - -
Apr5g1307 911 Gene3D - 13 322 IPR011989 -
Apr5g1307 911 MobiDBLite consensus disorder prediction 604 629 - -
Apr5g1307 911 SUPERFAMILY Tudor/PWWP/MBT 637 677 - -
Apr5g1307 911 MobiDBLite consensus disorder prediction 807 821 - -
Apr5g1307 911 Coils Coil 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1307 Apr-Chr5 17390226 17398352 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1307 - - gmx:100809147 1212.59