Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1306 ATGGCTCTCGGATTCTTCGCTCTCGCTCTCTTTCTTTTCCTCACTCTCGATTCTGACATCGCTCCTTCTTCCACCGCTTCTGCCTCCGCGGCTTCCGCCGAAGGCGTTGAGATTACTTACGGCACGGTTCTGAAGCTTATGCACGAAAAGACGAAATTTCGGTTGCACTCTCACGATGTGCCGTATGGTTCTGGCAGTGGACAACAATCAGTTACGGGTTTCCCCAGTGTCGACGATTCCAATAGTTATTGGATTGTTAGACCTCAACCTGGAACCTCAGCTAAACAAGGTGATGCCATTAAAAGTGGCACAATCATTAGATTGCAGCACATGAGGACAAGGAAGTGGCTGCACAGCCACTTGCATGCATCCCCGATATCTGGCAATCTCGAGGTGAGTTGCTTTGGAGGAGAGTCTGAATCTGACACTGGGGACTATTGGAGGCTTTTAATAGAAGGAAGTGGGAAGACTTGGAAGCAGGATCAGAGGATTCGCCTTCAGCATATTGACACTGGAGGCTATCTACACAGTCATGATAAGAAATACGCTCGGATTGCTGGGGGACAACAGGAGGTTTGTGGTGTTCGTGAAAAGCGTGCTGACAATGTCTGGTTGGCAGCTGAAGGTGTCTACCTTCCGGTTACTGAAAGCAAATGA 657 0.4901 MALGFFALALFLFLTLDSDIAPSSTASASAASAEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPSVDDSNSYWIVRPQPGTSAKQGDAIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESESDTGDYWRLLIEGSGKTWKQDQRIRLQHIDTGGYLHSHDKKYARIAGGQQEVCGVREKRADNVWLAAEGVYLPVTESK* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1306 218 Pfam MIR domain 69 202 IPR016093 -
Apr5g1306 218 ProSiteProfiles MIR domain profile. 97 152 IPR016093 -
Apr5g1306 218 ProSiteProfiles MIR domain profile. 155 209 IPR016093 -
Apr5g1306 218 PANTHER STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN 1 217 - -
Apr5g1306 218 ProSiteProfiles MIR domain profile. 35 89 IPR016093 -
Apr5g1306 218 Gene3D - 21 218 - -
Apr5g1306 218 SMART mir_2 97 152 IPR016093 -
Apr5g1306 218 SMART mir_2 35 89 IPR016093 -
Apr5g1306 218 SMART mir_2 155 209 IPR016093 -
Apr5g1306 218 PANTHER BNAA09G55850D PROTEIN 1 217 - -
Apr5g1306 218 SUPERFAMILY MIR domain 34 209 IPR036300 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1306 - - gmx:100811638 395.586