Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1298 ATGCTGTGTAAACTCATGTCCGGGCCACGGAAGAAGAAGCCTGGCACTGTTCCCGTTTACATTAACGTATATGACCTCACCCCCATTAATGGCTATGCATATTGGCTTGGCCTTGGAGTTTACCATTCAGGGGTTCAAGTTCATGGCATTGAATACGGTTTTGGGGCGCATGAACTTGACACAACGGGAATCTTTGAAGTGCAACCGAAACACTGTCCTGGGTTCACATTCAGAAAATCAATTTTCATTGGAACAACGGATCTGGGACCGAAAGATGTTCGGGCATTCATGGAGAAACTGGCTAAAGAGTACTCTGGCAGCACCTATCATCTCATCTCAAAAAATTGCAACCACTTCTGTAACGATGTTTGTCTCAAATTAACGGGAAAGTCAATCCCTCGATGGGTCAATCGACTGGCTCGACTTGGTCTTCTTTGCAACTGTGTTCTTCCCCCTGGCCTAAATGACACAAAGGTTCAACAAGTTACATTGGAAAGGGTTCAGGAAGGAGAAAAGAGGAAAACGAGAAGTCAATCAAGCAGGTTCGGGGCTTCCTCCAATTCTTCATTATCTAGTAGCCAAAGACATTGCCTTCCTCCGACTTCATCTTTGATTCATAATTCTTCAACCTCAACCTTAACAGTGAAGTAA 651 0.4439 MLCKLMSGPRKKKPGTVPVYINVYDLTPINGYAYWLGLGVYHSGVQVHGIEYGFGAHELDTTGIFEVQPKHCPGFTFRKSIFIGTTDLGPKDVRAFMEKLAKEYSGSTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLGLLCNCVLPPGLNDTKVQQVTLERVQEGEKRKTRSQSSRFGASSNSSLSSSQRHCLPPTSSLIHNSSTSTLTVK* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1298 216 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Apr5g1298 216 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 2 214 - -
Apr5g1298 216 Gene3D PPPDE domains 12 174 IPR042266 -
Apr5g1298 216 PANTHER DESUMOYLATING ISOPEPTIDASE 2 214 IPR008580 GO:0008233
Apr5g1298 216 MobiDBLite consensus disorder prediction 167 216 - -
Apr5g1298 216 Pfam PPPDE putative peptidase domain 18 150 IPR008580 GO:0008233
Apr5g1298 216 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Apr5g1298 216 MobiDBLite consensus disorder prediction 179 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1298 Apr-Chr5 17284572 17287175 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1298 K22763 - gmx:100306675 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0207 9 2675833 2678568 Apr5g1298 5 17284572 17287175 PCT