Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1297 ATGTCATCCCCCTTCCCTTCTTGCTTCCGCCCCTCCCCAACATCCGATGCCCACCCTCCTCCTCCTCCGCCGCCACCGCACTCGACCCACCCGAACCTCACGACCTATCTCTACCACACGGACATAGGCCTCGTTTCCCTGACGTGGTCACGCTCCCTAATGGGTCGTTCCTTGCACGTTCACCTCCATCACCACCCATTCGATTCCCCTCCTTTCCCTTCCCTCTCTTCTCCCTCTTTCCACCTCCACATCAAACCCTTCATCTTCTGGAAGAAACACGGCTCCAAGAAACTCTCCCCTAACACCCTTCTCTTCTGGAACCTCTCCAAAGCCAAATTCGCCTCTGGACCCGAACCCCACTCCTCCTTCTACGTCGCCCTCGTCGTCGACAACGAAATGACCCTTCTCGTCGGCGATTCCGCCAAGGAAGCTTATTCCAAGTCCAAAGCCCACGACCCCAAAAAGGCCCAATTCCTCCTCCTCAAAAGGGAACATGTGTTCGCCGACAAGGTTTACACCACCAGAGCCAGATTCGGCGGCAGAACTAGAGAGATTCAGATAGATTGTTCCTACAGGGACCATTCCAGGCTCTGTTTCAGCGTTGATGGAGAAAGCGTCTTGCAGATTAAGCGCTTGAAGTGGAAATTCAGGGGCAATGAGAGAGTGCAAGTGGATGGGGTCAACGTTCAAATCTCCTGGGACCTCTATAATTGGTTATTCGAGAAGGACAACAACGATGGACACGCCATTTTCATGTTCAAGTTCGAGGAAGAGGAGGACGAGGAAGGGATTGGAGAGAGGAATAACTTGGTGAATTTGTGGAATTTGGGGGTTTATGATTGGGGCAAAATGGGTAAGAGTTGGTCGTCTTCGTCGGTGTCGTTGGCTTCCTCAGCAGGATCGTTCGGTGGAAGCTCCTCCGTTTTGGAATGGTCGAGCGTTGAGGAGAATGAGTTGGTTGTTCCGGTTGGGTTCTCTCTGCTTGTTTATGCTTGGAAACGCTGA 1005 0.5264 MSSPFPSCFRPSPTSDAHPPPPPPPPHSTHPNLTTYLYHTDIGLVSLTWSRSLMGRSLHVHLHHHPFDSPPFPSLSSPSFHLHIKPFIFWKKHGSKKLSPNTLLFWNLSKAKFASGPEPHSSFYVALVVDNEMTLLVGDSAKEAYSKSKAHDPKKAQFLLLKREHVFADKVYTTRARFGGRTREIQIDCSYRDHSRLCFSVDGESVLQIKRLKWKFRGNERVQVDGVNVQISWDLYNWLFEKDNNDGHAIFMFKFEEEEDEEGIGERNNLVNLWNLGVYDWGKMGKSWSSSSVSLASSAGSFGGSSSVLEWSSVEENELVVPVGFSLLVYAWKR* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1297 334 PANTHER EXPRESSED PROTEIN 2 333 IPR008586 -
Apr5g1297 334 MobiDBLite consensus disorder prediction 1 30 - -
Apr5g1297 334 Pfam Plant protein of unknown function (DUF868) 31 333 IPR008586 -
Apr5g1297 334 PANTHER OS08G0422401 PROTEIN 2 333 - -
Apr5g1297 334 MobiDBLite consensus disorder prediction 13 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1297 Apr-Chr5 17278707 17280743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1297 5 254 EF-hand Containing Proteins AT5G28150 37.692 3.13e-53 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1297 - - cam:101507611 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0206 9 2670679 2672026 Apr5g1297 5 17278707 17280743 PCT