Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1288 ATGCCGTTAGTCATGAATTGGTGGGGTAGTAACGAGGTTAATGTAAAACGTGCCCCGCCGGTGTCCCAAACCCGATATTTTGCAACCGTTAACTCTTTCTTCTCTCTCCCCGACAGTGGCAGGCCACAAAATGAGGGAAAGGTTGTGGGCCTTTTCCGGGTGGATGAAATTGCTTCTGAACCGTTCGAGAATTCCCCCTTTCCCTTAGCTTTAGCTGCAGAGAGAACACGAAGAGAAGACCCTCTCGATGGCTTCAATACGTACACTAATGGATGGAATATCAGTGACCGCCATTATTGGGCTTCTGTGGCATACACTGCAGTTCCTGTGTTCAGTATTGCAGCAGTCTGGTTCTTGGGCTTTGGCTTGTGCTTATTGCTCATCACTGTTTGTTACTTCTGTCGTAAAAGAGCGCCTTATGGTTATTCATCAACATGCTATGCTCTTTCCCTTATTCTCCTGATATTATTCACATTTGCAGCAATAATTGGATGTGCAGTTCTCTACATTGGCCAAGGAAGTTTTCATCACAGCATGACTACAACATTGCAGTATGTGGTACAACAAGCTGATTCTACTGTGGATAAGCTTAGGAATGTGTCCGATTATCTTGCTCAAGCTAAGCAAGTTGGAATTGATCGAGTTTTTCTCCCTACTAATGTTCAAACTGATATTGACGAGGCTGAAACAAATATCAATGCCTCTGCTAGCACACTTGCTGATAAGACAAAGGAGAACTCAGACAACATACAAGACCTCTTAGATTCTGCGAGGCTGGCACTTATCATAATAGCTGCTGTTATGCTAGTCTTGACATTTCTTGGATTTTTGTTCTCAATTTTTGGCATACAGCTCCTTGTGTATATCTTGGTAGTCGCAGGATGGATTCTTGTTACTGGCACCCTTATATTATGTGGCTTGTTCCTTGTTCTCCACAATGCAACAGAAGACACTTGTGTAGCTATGAATGAATGGATCCAGTATCCCACAGCACATACGGCTCTGGACGATATTCTTCCCTGCGTGGACAACGCCACTGCACAAGAAACATTCTTACGAAGCAAAGAAGTAACTTCTGAACTAGTCAATTTGGTCAACCAAATTATCACCAATGTCTCCAACTTAAATTTCGCCCCCAATTTCACTCCACTATACTATAACCAATCTGGCCCCCTCATGCCGCTCCTCTGCAATCCATTCCATCCTGACATGACGGATAGACAATGCGACGCTGGAGAAGTGACCCTAAGCAATGCAACACAGGTATATGGCAACTTTGTTTGCCAGGTATCACCATCTGATATATGCACGACACAAGGGCGTTTGACACCTACCTTCTATAACCAAGTTTCGGCCGGAATAAACGTGGGCAACGCCTTGTATAATGATGCCCCATCCCTGGTTGAGCTACAAGACTGCACCTTTGTTCGGGAAACTCTGAGTGAAATATCCAGTGACCATTGTCCTGGTTTAAAGCGTTACAGTAAATGGGTCTATATTGGATTGGTAATGGTCTCTTTTGCTGTAATGTTCTCCTTGATCTTCTGGATTGTGTATGGGAGAGAAAGGAGACATCGACTGTATGCTAAGGACTCAAAAGTCTTAACTCCTTCACCAGCACAAGTACCAGGACACGCATTAGCACTAGCCCAGATCCCTGAAGGGGACAAAGATAATTAA 1680 0.4411 MPLVMNWWGSNEVNVKRAPPVSQTRYFATVNSFFSLPDSGRPQNEGKVVGLFRVDEIASEPFENSPFPLALAAERTRREDPLDGFNTYTNGWNISDRHYWASVAYTAVPVFSIAAVWFLGFGLCLLLITVCYFCRKRAPYGYSSTCYALSLILLILFTFAAIIGCAVLYIGQGSFHHSMTTTLQYVVQQADSTVDKLRNVSDYLAQAKQVGIDRVFLPTNVQTDIDEAETNINASASTLADKTKENSDNIQDLLDSARLALIIIAAVMLVLTFLGFLFSIFGIQLLVYILVVAGWILVTGTLILCGLFLVLHNATEDTCVAMNEWIQYPTAHTALDDILPCVDNATAQETFLRSKEVTSELVNLVNQIITNVSNLNFAPNFTPLYYNQSGPLMPLLCNPFHPDMTDRQCDAGEVTLSNATQVYGNFVCQVSPSDICTTQGRLTPTFYNQVSAGINVGNALYNDAPSLVELQDCTFVRETLSEISSDHCPGLKRYSKWVYIGLVMVSFAVMFSLIFWIVYGRERRHRLYAKDSKVLTPSPAQVPGHALALAQIPEGDKDN* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1288 559 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 62 532 IPR040283 -
Apr5g1288 559 PANTHER TRANSMEMBRANE PROTEIN 62 532 - -
Apr5g1288 559 Coils Coil 225 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1288 Apr-Chr5 17178172 17182081 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1288 - - gmx:100816139 900.197