Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1280 ATGGGTTTGAGATACAAGGCTGGTTTGTTCCTCATAGCCACTGTCGTTATTATTTGGGTCACCTCTGCAGAAGTTACCCAGGATATTTTTACAGATTATAAGCAGCCATTTGCAGTGACATATCTTGGAGCTTCTCTTATGGTAGTGTACCTCCCAATAGCATTCATTAAGGACTGGTTCTGTAACTTACTTAAATGCCGCTCTTCTAAAAGTGGTAAAAATGCAGAATGCGTGGATGAGTATTCTGTCAGCATTAGCTCTCCTCTCAAAGACAATGGAATGCAGAAAAATTTTGAGCTGGAACTGGGGAGTGTAATTCGAAAAGATAGTGATTTAGACCTTTCAACTCTTGCAGAAGTAAAGCCTTTAGTAGCTAAATATAATGATAATATTAATGTCCTAAAGACAGAGAGAGAACTTACTGGGAAGGAAATTGCTACTTATGGATTTTACATTGCACCTATCTGGTTTATAACAGAGTATCTATCAAATGCTGCCCTTGCACGAACAAGTGTTGCAAGTACAACAGTATTATCATCAACTTCAGGACTTTTCACACTCTTCATTGGTGCATTTATGGGTCAAGACTCCTTAAATGTAGCAAAAGTAGTTGCTGTCTTGGTTAGCATGGCTGGGGTTGTCATGACAACACTGGGGAAAACTTGGGCCGCAGATGAATCGCAATTAAGTGCTGCCAATGGAAAGCACTCTTTTGTTGGAGATCTTTTTGGAATTCTCTCGGCTATGACTTATGGTTTATTTACTGTTCTTCTTAAAAAAATTTCTGGTGAAGAAGGAGAAAGGGTTGATATGCAAAAGCTTTTTGGGTATATTGGATTGTTCACACTTGTAGCACTCTGGTGGCTTGTCTGGCCACTGATGGCCCTAGGAATTGAACCCAAATTTACCATTCCCCACTCTGCCAAAGTGGATGAAGTGGTTCTTGCCAATGGATTAGTTGGAAGCGTATTGTCAGACTACTTCTGGGCACTTTGTGTTGTATGGACTACTCCCCTTGTGGCCACTTTGGGTATGTCACTCACCATTCCTCTGGCTATGGTGGCTGACATGGTAATTCATGGTCGACATTATTCAGCAGTATACATTCTTGGTTCAGCTCAGGTATTTGCAGGCTTTGTAATAGCTAATCTTTCAGATTGGTTGACGAAGAAGTTGGGATTATAA 1185 0.4059 MGLRYKAGLFLIATVVIIWVTSAEVTQDIFTDYKQPFAVTYLGASLMVVYLPIAFIKDWFCNLLKCRSSKSGKNAECVDEYSVSISSPLKDNGMQKNFELELGSVIRKDSDLDLSTLAEVKPLVAKYNDNINVLKTERELTGKEIATYGFYIAPIWFITEYLSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDSLNVAKVVAVLVSMAGVVMTTLGKTWAADESQLSAANGKHSFVGDLFGILSAMTYGLFTVLLKKISGEEGERVDMQKLFGYIGLFTLVALWWLVWPLMALGIEPKFTIPHSAKVDEVVLANGLVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAVYILGSAQVFAGFVIANLSDWLTKKLGL* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1280 394 PANTHER OSJNBA0070O11.5 PROTEIN 1 393 - -
Apr5g1280 394 Pfam EamA-like transporter family 138 217 IPR000620 GO:0016020|GO:0016021
Apr5g1280 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 142 220 - -
Apr5g1280 394 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 1 393 - -
Apr5g1280 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 280 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1280 Apr-Chr5 17126059 17131001 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1280 K15289 - gmx:100792013 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0187 9 2421013 2427429 Apr5g1280 5 17126059 17131001 PCT