Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1278 ATGATGCTTCCATGGCAGCGAATGAGATTCACCGGCACGGATTCGGTGAATCCCGTTCCACTTAACTTTAGAAGAGAAGTTTCCGGCGAGAATCAACTCAATACTGTTGGAGATGCCGGTCACTCAAATAACACAATAACCAAGGAAGTAGCAAAAGTGAAGAGAAGAAACGAAAAGCTAGAAGAACGACTTGCGCGAGCAAGAGCTTCGATGCGCAGAGCGGCTGCAAGAAACTTCACTTTAGCAACACCACACGACGACATTTCCACCGGAACTGTTTATCATAACCCGCACTTATTTTACCAGAGCTATTTGGAGATGGAGAAGATATTGAAGGTCTACGTATACCCAGATGGGGAACTACCAATTGTTCACGATGGCCCGTGCAAGGACATATACTCGATTGAAGGGAGGTTCCTCCATGAGATGGAATTTGGGGTTGGGAGGTTTAGGACCAATGACCCCACTACGGCTCACGTTTACTTTCTTCCATTCAGTGTGACATGGATGGTCAAGTACCTCTATACACCATCCACTTACGACGTCACTCCTTTAAAGCATTTTGTCTCCGAGTATGTGAGAGTGATATCTAAGAGGTACCCTTTCTGGAATACAACTCATGGTGCCGACCACTTCATGCTTTCTTGTCATGATTGGGGTCCTCATGCATCAGAGGGAAACCCTTTCCTCTACAACACCTCCATCCGGGTCTTGTGCAATGCCAACACTTCTGAAGGCTTCAATCCTATGAAGGACGTGCCTTTGCCAGAAATCCATCTCTATGGGGGTGAAGTATCCCCTAAGCTCCTTTCACCTCCACCAGACGACGCTCCACGTCCCTATCTTGCATTCTTCGCTGGTGGAATGCATGGCCCAATTCGGCCCATCCTACTCCACCATTGGAAAAACCGAGACGATGATATACGTGTCTACGAGTACCTACCGAAAGACAAAGACTACTATTCCTTCATGCTCAACTCCAAGTTCTGCCTTTGTCCAAGTGGGTATGAAGTGGCTAGCCCGAGAATCGTGGAGTCAATTTATGCTGAATGCGTGCCCGTGATCCTGTCAAAGAATTATACGTTACCCTTCAGTGATGTGCTGCGATGGGAGGCGTTTTCAGTGCAGGTGGATGTTTCAGATATTCCAAGTTTGAAAGAGATGCTTAGTACAATTCCAGAGAGCAAATACCGGAAGCTCAAGCATGGAGTAAAGGCTGTGAGGAGACATTTTACTCTGAATCAACCCGCTAAGAGATTTGACGTCTTTCACATGATCTTGCACTCCATATGGCTGAGGAGATTAAATATAAATATAAAACTCAGATAA 1329 0.4612 MMLPWQRMRFTGTDSVNPVPLNFRREVSGENQLNTVGDAGHSNNTITKEVAKVKRRNEKLEERLARARASMRRAAARNFTLATPHDDISTGTVYHNPHLFYQSYLEMEKILKVYVYPDGELPIVHDGPCKDIYSIEGRFLHEMEFGVGRFRTNDPTTAHVYFLPFSVTWMVKYLYTPSTYDVTPLKHFVSEYVRVISKRYPFWNTTHGADHFMLSCHDWGPHASEGNPFLYNTSIRVLCNANTSEGFNPMKDVPLPEIHLYGGEVSPKLLSPPPDDAPRPYLAFFAGGMHGPIRPILLHHWKNRDDDIRVYEYLPKDKDYYSFMLNSKFCLCPSGYEVASPRIVESIYAECVPVILSKNYTLPFSDVLRWEAFSVQVDVSDIPSLKEMLSTIPESKYRKLKHGVKAVRRHFTLNQPAKRFDVFHMILHSIWLRRLNINIKLR* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1278 442 Pfam Exostosin family 109 391 IPR040911 -
Apr5g1278 442 PANTHER XYLOGALACTURONAN BETA-1,3-XYLOSYLTRANSFERASE 42 438 - -
Apr5g1278 442 Coils Coil 43 77 - -
Apr5g1278 442 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 42 438 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1278 Apr-Chr5 17111091 17114042 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1278 - - aprc:113866218 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0186 9 2406832 2412631 Apr5g1278 5 17111091 17114042 PCT