Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1273 ATGCAGAGACGAAGTCCTCCCAAGCATCGCCACGATGGGACTTCGCCGCTGCCTCTCGGCATGGATTGGAGTCCTGCACCTAGAAAATGGAATGGACGGGACACAGTATGGCCACACAATCATCGTACTGGTTGGAGTTATTGTGTCACTATACCTTCGTGGGTTTTCATTCCAAAATCAAGGAATTCAGATCCTATAGTGTTCTACAGGCTTCAAGTTGGCGTACAGTCACCAGAAGGGATTACAAAACTCCATGGAGTATTAAGAAGGTTCAATGATTTTCTAAAGTTGTTTGCTGATCTTAAAAAGGAGTTTCCCAGGAAAAATATCCCTCCAGCACCACCCAAGGGACTCTTACGATTGAAAAGCCGGGCTTTGTTAGAAGAGAGAAGGTGCTCTTTGGAGGAGTGGATCACCAAACTATTGTCTGACATTGATATATCAAGATGTGCTGCAGTGGCATCATTTCTCGATTTGGAAGCTGCTGCTAGATCTTCAATTCAAGATGCAAGCCAGCAGAATTCAGAATCCGATCCAGATTCCAATAACAGAGCTTATTCAGTGCAATCACCTCTCCACTCAAGCTTATCATTAGTTGCTGGCAGTTCGTCTGTGGCCTCAGATTATGGTAGTGATACTGCATATGAGCCCTCTGACCTAGGAACTCCAAGAATTGGACAGGACGATAATTCTGAAGTTGGCACAGATGATTTAACATTAGATGAAGATATGACCAATCCAATAGAAAAGCTTGTGAAATATGGAATATCAAATATTGACGAAGGTTTGTTTGTGGGTCAAACTATTCTGGAGCAATTGGAAGGCCTTCCTAGGCATAAAGCAAATGCCAGACATGTGAACTATGTTACAGAAAAGGACAAAAATAATGGTAATTCATATAATTCTTCACTTTTGGCTAATAATACCATGGAGCTTTTCTCTGAGCCTGGGCATGCCAAGGTTAGTAGTCATGTTCGCAAGCTTTCAAACGAGAGTATTGGAAGTGATGGAAGCTCCATAAGAGGCAGCGACATGTCTAATTTTGGGATTCCAAATTCATCGGGTGATGGCTGTCATGACCTTCCTGGATGTGCTTTAGTATCGAGAGAAACAGATACTATGGGCCATGCAAAGTTGAAGGGTACTGATGATGCTCAATTAGTACTTCCCCTAGATCAACGCAATAAATTGAACAGGATTCTTTCGACAATGCAGCGAAGGCTAATCACTGCAAAAACTGATATGGAGGACCTTATAGCTAGATTAAATCAAGAAATAGCTGCAAAGGATTTCCTTGCAACAAAGGTCAAGGATCTGGAAATAGAACTTGAAACTACCCGAGAGAAAAATAAGGAGAACTTGCAGCAGGCTATTCTAATTGAGAGGGAAAGGTTTACCCAAATGCAGTGGGATATGGAGGAACTTAGACAAAAGTCATTGGAAATGGAGATGAAACTAAAGTTTGAATCGGGTGGAAATTCTAATCAGAACTTGACAAAGGAATCAATTGCTCAGCAGAATGATGTATTGTTGCAGAATTTAGATGCTACTAACGAGCAGCTGGAAATCTTGTCAAAACAGTATGGAGAGCTAGAAGCAAAATCCAAAGCAGATGTTAAAGTTCTGGTTAAAGAGGTCAAATCTCTCCGTAATTCTCAAACAAAGTTGAAGAAAGAACTTAATGAGTCGATAAAGGAAAACTGCGAAACTGAGAAACTACTACTTCACGAAAGAGAGAAGAGGGAGCAGGCAGAAGCTGCTCGGAAAAAACTGCTGGAAAAATGCAGGCTTCTTTTCAACCGGCTTCAGGAGTGCAATGTCAGTCTTCCTAATGAATATGAAGATAGGACAATCGTGAGTTCATCACCATCATTACCTGATGCTTTTAATCAATTAACGACTTCTGATGACCAAATTGACATCGTACTAGCGGAGGTAGAAAACTTAGAGAAGGACTATGGAAGTGAGGCTTCCAATGTAGATAAAACCAATGACATAAAAGATGGTGTAATCTGTGATGATGAAATGAGAAAGATCATAGCAGATTTGTTCATCGATAATGTTAGATTGAGAAAACAGACAAACCGCGTTACAAGGCATGCTCTCAAATTGGACATGACAGCAAGTGATGATTCCCCTTCAATGGAAACTGTAACAAGTATTTAA 2166 0.4086 MQRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGRDTVWPHNHRTGWSYCVTIPSWVFIPKSRNSDPIVFYRLQVGVQSPEGITKLHGVLRRFNDFLKLFADLKKEFPRKNIPPAPPKGLLRLKSRALLEERRCSLEEWITKLLSDIDISRCAAVASFLDLEAAARSSIQDASQQNSESDPDSNNRAYSVQSPLHSSLSLVAGSSSVASDYGSDTAYEPSDLGTPRIGQDDNSEVGTDDLTLDEDMTNPIEKLVKYGISNIDEGLFVGQTILEQLEGLPRHKANARHVNYVTEKDKNNGNSYNSSLLANNTMELFSEPGHAKVSSHVRKLSNESIGSDGSSIRGSDMSNFGIPNSSGDGCHDLPGCALVSRETDTMGHAKLKGTDDAQLVLPLDQRNKLNRILSTMQRRLITAKTDMEDLIARLNQEIAAKDFLATKVKDLEIELETTREKNKENLQQAILIERERFTQMQWDMEELRQKSLEMEMKLKFESGGNSNQNLTKESIAQQNDVLLQNLDATNEQLEILSKQYGELEAKSKADVKVLVKEVKSLRNSQTKLKKELNESIKENCETEKLLLHEREKREQAEAARKKLLEKCRLLFNRLQECNVSLPNEYEDRTIVSSSPSLPDAFNQLTTSDDQIDIVLAEVENLEKDYGSEASNVDKTNDIKDGVICDDEMRKIIADLFIDNVRLRKQTNRVTRHALKLDMTASDDSPSMETVTSI* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1273 721 Coils Coil 539 566 - -
Apr5g1273 721 Gene3D - 47 185 IPR036871 GO:0035091
Apr5g1273 721 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 714 IPR044588 GO:0015031
Apr5g1273 721 SMART PX_2 55 160 IPR001683 GO:0035091
Apr5g1273 721 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Apr5g1273 721 SUPERFAMILY PX domain 40 160 IPR036871 GO:0035091
Apr5g1273 721 Coils Coil 429 456 - -
Apr5g1273 721 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 714 - -
Apr5g1273 721 Coils Coil 500 534 - -
Apr5g1273 721 Pfam PX domain 87 158 IPR001683 GO:0035091
Apr5g1273 721 MobiDBLite consensus disorder prediction 1 26 - -
Apr5g1273 721 MobiDBLite consensus disorder prediction 168 188 - -
Apr5g1273 721 MobiDBLite consensus disorder prediction 207 242 - -
Apr5g1273 721 Coils Coil 574 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1273 Apr-Chr5 17053275 17063015 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1273 - - gmx:100792151 1261.9