Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1267 ATGGCTCCGACGACGATCCGGAAGGCGATTGGGGTGGTGAAGGACCAGACCAGTATTGGAATAGCGAAGGTGGCGAGTAACATGGCGCCGGATTTGGAGGTTGCGATTGTGAAGGCGACGAGTCACGACGATGATCCTGCGAGCGAGAAGTACATAAGGGAGATCTTGAACCTCATGTCGTACTCGCGTGGATACGTCCACGCGTGTGTTTCCGCGGTGTCGAAGCGTTTGGGGAAGACGCGCGACTGGATTGTGGCGCTCAAGGCGCTCATGCTGGTGCACCGCTTGATGAACGAGGGTCCACCGCTGTTCCAGGAGGAGATCCTGTACGCCACCCGTAGAGGAACCAGGCTCCTCAACATGTCTGATTTCAGAGATGAAGCTCACTCGAGCTCTTGGGATCACTCTGCTTTTGTGAGGACCTATGCTATGTATCTTGATCAGCGTCTTGAAATGATGCTGTTTGATAGAAAGAGTGCCAACGGTGGCAGTGTTGGGGGTAGTGTTGGCGGTGCAGATGATAGGTTTGGTGGGAGGGACAGTTTTAGGCCGGACGATAGGTTTGGTGGAAGAGACAATTTTAGGTCGCCGCCATATGAATACGGAGGTGGGGAATTTAGAGGGGAAGGGGAGTATGGGAACGGGAATGGGATGAGGAGGACGAGATCGTTCGGGGACATGACTGAAACGACGGGGAGGGAAGAGAAAAGGATTGTGAGTGTGACTCCTTTGAGGGATATGCAGCCGGAGAGGATTTTTGGCAAGATGGGTCACTTGCAGAGGTTGTTGGATCGTTTCTTGGCTTGTAGGCCTACTGGGTTGGCCAAGAATAGCAGGATGGTTTTGATTGCGTTGTATCCTGTGGTCAAGGAGAGTTTTCAGTTGTATGCTGATATATGTGAGGTTTTGGCTGTGTTGCTTGACAAATTCTTTGATATGGAGTACCCTGATTGCGTGAAGGCCTTTGATAGTTATGCCAGTGCTGCTAAGCAGATCGATGAGTTGGTTGCCTTCTACAATTGGTGTAAGGACACAGGTGTGGCAAGGTCCTCGGAGTATCCAGAAGTTCAGAGGATTACTAGCAAGTTGCTGGAGACATTGGAGGAGTTTGTAAGGGACAGGGCCAAGAGGCCAAAAAGTCCAGAGAGGAAAGAGGAAGCGCCGCAGGTGGAAAAAGTAGAGGAGGAGCCTGTTCCGGATATGAATGAGATCAAGGCACTGCCTCCACCTGAGAATTATAACCCTCCTCCTCCACCTGAGCCGGAGCCTAAGCCACAGCAGCCACAAGTTACAGAGGACTTGGTGAATCTGAGAGATGATGCAGTCACTGCAGATGACCAGGGTAATAAATTGGCTTTGGCACTCTTTGCTGGTGCACCAGCTAATAATGCCAATGGATCATGGGAAGCCTTCCCATCAAATGGACAGCCAGAGGTGACTTCAGCTTGGCAAACCCCAGCTGCAGAACCTGGGAAAGCCGATTGGGAATTGGCATTGGTAGAGACTGCTAGCAATTTGTCAAAGCAGAAGGCAACTTTAGGTGGTGGGTTTGATCCCTTATTGTTGACTGGCATGTACGATCAAGGAATGGTCAGGCAGCATGTCAGCACTTCCCAACTGAGTGGGGGGAGTGCAAGCAGTGTGGCATTGCCAGGGCCGGGAAAGACTACAACTCCAGTTTTGGCTCTCCCAGCCCCAGATGGATCTGTCCAGCCAGTGAATCAGGATCCATTTGCTGCATCGTTGAGCATTCCTCCTCCATCCTATGTGCAAATGGCTGATATGGAGAAAAAGCAGCACTTGCTCGTGCAGGAGCAGCAGCTGTGGCATCAGTATGCAAGAGAAGGGATGCAAGGCCAATCTAGCTTGACCAAACTGAATGGCACCGGATACTATGCTGGAGGTCCTGTGCCAATGATGCCTTATGGAATGCCCCCAGTCAATGGAATGGGACCTCCAACCGGGTATTATCATGCTCCTTACTGA 1986 0.5141 MAPTTIRKAIGVVKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDPASEKYIREILNLMSYSRGYVHACVSAVSKRLGKTRDWIVALKALMLVHRLMNEGPPLFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLEMMLFDRKSANGGSVGGSVGGADDRFGGRDSFRPDDRFGGRDNFRSPPYEYGGGEFRGEGEYGNGNGMRRTRSFGDMTETTGREEKRIVSVTPLRDMQPERIFGKMGHLQRLLDRFLACRPTGLAKNSRMVLIALYPVVKESFQLYADICEVLAVLLDKFFDMEYPDCVKAFDSYASAAKQIDELVAFYNWCKDTGVARSSEYPEVQRITSKLLETLEEFVRDRAKRPKSPERKEEAPQVEKVEEEPVPDMNEIKALPPPENYNPPPPPEPEPKPQQPQVTEDLVNLRDDAVTADDQGNKLALALFAGAPANNANGSWEAFPSNGQPEVTSAWQTPAAEPGKADWELALVETASNLSKQKATLGGGFDPLLLTGMYDQGMVRQHVSTSQLSGGSASSVALPGPGKTTTPVLALPAPDGSVQPVNQDPFAASLSIPPPSYVQMADMEKKQHLLVQEQQLWHQYAREGMQGQSSLTKLNGTGYYAGGPVPMMPYGMPPVNGMGPPTGYYHAPY* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1267 661 PANTHER - 5 637 - -
Apr5g1267 661 MobiDBLite consensus disorder prediction 373 430 - -
Apr5g1267 661 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 637 IPR045192 GO:0048268|GO:0072583
Apr5g1267 661 Pfam ANTH domain 229 373 IPR011417 GO:0005543
Apr5g1267 661 Pfam ANTH domain 31 153 IPR011417 GO:0005543
Apr5g1267 661 CDD ANTH_N_AP180_plant 32 151 - -
Apr5g1267 661 MobiDBLite consensus disorder prediction 373 401 - -
Apr5g1267 661 Gene3D - 2 156 IPR008942 -
Apr5g1267 661 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Apr5g1267 661 SMART enth_2 30 160 IPR013809 -
Apr5g1267 661 Gene3D ANTH domain 236 386 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Apr5g1267 661 SUPERFAMILY GAT-like domain 243 373 - -
Apr5g1267 661 MobiDBLite consensus disorder prediction 205 224 - -
Apr5g1267 661 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Apr5g1267 661 MobiDBLite consensus disorder prediction 409 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1267 Apr-Chr5 17012496 17015924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1267 - - gmx:100803282 1085.48