Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1262 ATGATGGATCCAAGCAACCTTTTGCCAACTGATGGACTTGAAGTCCACCAAAATGGTGTTCAGGATGAAAGGGAATGTTCTGATTGTGTTGTTCCAAATGTAGACCTTGATGTCACTGAAATTATAGAAACTAAAACTCCGAATGGAAATTTTGAAAATTTCAACAAGTCAGATAGTACTGCAACTGATTACTCATCCAAGGTGGAAGTCAAGGAAGGATCAAATGACAATGTAGACAGCAACAATGTCACCATTACCAAGGAAGAGCAAGTGGAAATTGTAAACCAAGCAGAGCAAGTGAAAGCACAAAAGGGACCTGTCAAGAATAAGAATGCAAAGATTCAAAGCCCCAGAGGTGTTCATGCAGGTTCATTAAAAAAGAGAACAGATGGAAAAGATGAAAAGACAGCATATCTTGTTTCAAATGGTACTTTCGCAGCAGAATCTCATCCAAGACAACCTGTTAAAAACAAATCATTCAGTGACAAGCAGACTCGATTATCCAAGCACCCCGGAAAGTCTAATGCAGCATCTATGGAAGCATCAATGGAAAACACTAGACCGCAATCATTGAAGAAGGGGCCCCTTGACAGTCTTCAAGGAGAAGCAGAATCTTCTACTCCTACTGCAGAAGATGCGAAAACTCGCAGGATGGGGACACTCCCAAATTATGGATTCAGTTTTAGGTGCAATGAGCGAGCTGAGAGAAGAAAAGAGTTCTACTCTAAGCTTGAGGAAAAGATTCATGCAAAGGAAGTGGAGGAGAGTAACCTACAAGCAAAAACCAAGGAGACACAAGAAGCTGAGATTAAGAAGCTTAGAAAAAGTCTTGGATTTAAAGCAACTCCAATGCCAAGCTTCTACCAGGAGCCTCCTCCTGTTAGGATGGAGTTAAAAAAGATGCCAACTACAAGAGCAAAATCTCCTAAGCTTGGCCGTAGGAAGAGTTCAACGTATTCAGAAGAAAACACTGGCAGCAGTGCTCGACAAGGTCGTTTAAGTCTGGATGAGAAAGTGTCACAGACTAACCCCACTAAAGGAATTACTCCTGTTCATCAAAAGAAGCCACAAAGAAGGTCTCTTCCTCCTCGACTGAATTCTGAAAAGATAAATTCATCCAATTCAACAGTTGCACGGACATCATCTAAGTTAGTGAATGATGAGAAAACCCTGTCTAGTGTGAAAACTGAAGTTACCACCTTTTCCGATGCAACAGGAGAAGAGAAAGTTGAAATGGCTGCAGCCATTGAAGAGAACAGTGCCTTATCCAATGAGACAAGCAAAGCTCTGCCTCTAAACACGCAGCCGGGTGAAGCAAATTCTCCTGTGAATGGTGATTTAGTCATTGACAATAAATCACAGCTCACCTTGGTACAAGAACCCATAGCAGCTGAGCATTAA 1401 0.4168 MMDPSNLLPTDGLEVHQNGVQDERECSDCVVPNVDLDVTEIIETKTPNGNFENFNKSDSTATDYSSKVEVKEGSNDNVDSNNVTITKEEQVEIVNQAEQVKAQKGPVKNKNAKIQSPRGVHAGSLKKRTDGKDEKTAYLVSNGTFAAESHPRQPVKNKSFSDKQTRLSKHPGKSNAASMEASMENTRPQSLKKGPLDSLQGEAESSTPTAEDAKTRRMGTLPNYGFSFRCNERAERRKEFYSKLEEKIHAKEVEESNLQAKTKETQEAEIKKLRKSLGFKATPMPSFYQEPPPVRMELKKMPTTRAKSPKLGRRKSSTYSEENTGSSARQGRLSLDEKVSQTNPTKGITPVHQKKPQRRSLPPRLNSEKINSSNSTVARTSSKLVNDEKTLSSVKTEVTTFSDATGEEKVEMAAAIEENSALSNETSKALPLNTQPGEANSPVNGDLVIDNKSQLTLVQEPIAAEH* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1262 466 PANTHER PROTEIN WVD2-LIKE 5-RELATED 2 456 - -
Apr5g1262 466 MobiDBLite consensus disorder prediction 155 169 - -
Apr5g1262 466 MobiDBLite consensus disorder prediction 420 446 - -
Apr5g1262 466 MobiDBLite consensus disorder prediction 364 396 - -
Apr5g1262 466 MobiDBLite consensus disorder prediction 282 396 - -
Apr5g1262 466 MobiDBLite consensus disorder prediction 178 193 - -
Apr5g1262 466 MobiDBLite consensus disorder prediction 99 217 - -
Apr5g1262 466 Coils Coil 241 271 - -
Apr5g1262 466 PANTHER PROTEIN WVD2-LIKE 4 2 456 IPR044833 GO:0008017
Apr5g1262 466 Pfam Targeting protein for Xklp2 (TPX2) domain 226 293 IPR027329 -
Apr5g1262 466 MobiDBLite consensus disorder prediction 318 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1262 Apr-Chr5 16967644 16979091 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1262 - - gmx:100804879 660.988