Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1240 ATGAGCTACAGCAGCTCCTCAATGAGTTCTGGTAGTGGAACTGCTAGAAGGACATTTGAGTTTGGAAGGACCCATGTGGTAAGACCTAAAGGGAAACACCAGGCAACTATAGTTTGGTTACATGGCCTTGGTGATAATGGCTCAAGCTGGTCCCAACTCTTGGAAACTCTTCCTCTTCCAAATATTAAATGGATTTGCCCAACTGCTCCTACTCGGCCTGTTGGCATATTTGGGGGATTTCCTTGCACTGCTTGGTTTGATGTTGGGGAGATTTCAGAAGATGCTCCTAGTGATTTGGAGGGTTTGGATGCTTCTGCAGCACATGTTGCCAATCTTTTGTCAACAGAGCCCCCAAATATCAAACTAGGTGTTGGGGGCTTCAGTATGGGTGCTGCAACTGCTCTATACTCAGGTACCTGCCATGTTTTGGGGCGCTATGGGAATGGAAACATTTATCCCATTAACTTAAGTGCTGTTGTTTCTTTAAGTGGCTGGCTTCCTTGTTCAAGGACCTTGAAAAGTCAGATTGAAGGATCACACAATGGCATAAGGCGCGCAGCATCATTGCCCTTATTTCTCTGCCATGGAAGAGGTGATGATGTGGTTGCATATGAACTTGGAGAGAAGTCTGCAATGACCTTAAGCTCATCAGGATTCCAGAATCTTACATTTAGGAGCTACAACGGGTTGGGTCACTATACAGTCCCTGAAGAGACTGATGAAGTTTGCAGGTGGCTAACTGCAAATTTGGGACTTGAAGGGTTTCGGTTGAACTAG 777 0.4569 MSYSSSSMSSGSGTARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTRPVGIFGGFPCTAWFDVGEISEDAPSDLEGLDASAAHVANLLSTEPPNIKLGVGGFSMGAATALYSGTCHVLGRYGNGNIYPINLSAVVSLSGWLPCSRTLKSQIEGSHNGIRRAASLPLFLCHGRGDDVVAYELGEKSAMTLSSSGFQNLTFRSYNGLGHYTVPEETDEVCRWLTANLGLEGFRLN* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1240 258 Pfam Phospholipase/Carboxylesterase 25 247 IPR003140 GO:0016787
Apr5g1240 258 SUPERFAMILY alpha/beta-Hydrolases 25 249 IPR029058 -
Apr5g1240 258 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 254 - -
Apr5g1240 258 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 254 - -
Apr5g1240 258 Gene3D alpha/beta hydrolase 14 251 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1240 Apr-Chr5 16825098 16830308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1240 1 254 Acyl Lipid Metabolism Gene Families AT5G20060 67.717 3.93e-132 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1240 K06130 - gmx:100811642 493.426