Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1228 ATGTCCAAGGTTCATCTTCATTTCCAACCCCTAATCCTGTTATGTCTCGTCCTCTCAACATTGTTCATCCACTACTCTCTGGCTGACGTTGGCACTGCTGCCCAATATGGCTCTCCCTTTTTACCAACGGCGTGTTTCGGTAGAGACGCATCACAATTCCCATCGAGTAACATGTTTGGTGCAGCAGGGGAAGGAATATGGGACAATGGTGCCGCATGTGGAAGACAGTACGAGGTGAGGTGTATAAGCGCAGCAGCTCCTGGAACATGCATTCCTGGCCAGACCATTCAGATTAAGATTGTTGATAGAGCACAGTCCTCTGTTTCTAGGCCTTCCGTTACTGGAACATCTATGGTTCTCTCCACCACTGCTTTTCAGGCCATAGCTAGTTCTTCTTCTTCCTTCCTTAACATTGAATTCCAACAGTAA 429 0.4732 MSKVHLHFQPLILLCLVLSTLFIHYSLADVGTAAQYGSPFLPTACFGRDASQFPSSNMFGAAGEGIWDNGAACGRQYEVRCISAAAPGTCIPGQTIQIKIVDRAQSSVSRPSVTGTSMVLSTTAFQAIASSSSSFLNIEFQQ* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1228 142 Gene3D - 29 142 IPR036908 -
Apr5g1228 142 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 9 142 - -
Apr5g1228 142 Pfam Lytic transglycolase 66 139 IPR009009 -
Apr5g1228 142 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 31 142 IPR007112 -
Apr5g1228 142 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 9 142 - -
Apr5g1228 142 SUPERFAMILY Barwin-like endoglucanases 16 142 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1228 Apr-Chr5 16743270 16743890 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1228 - - gmx:100803494 215.698