Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1210 ATGGTTTTACACTCTTCCACGCTCTCCTTCTTCTCCACTCCTATTCTGCTCCCTAACAGGAGCAGGGTTATCCTTAACCAACACAAATGCCCATTATCCGAGGAAACGCCCCCCTTTTCATGTCGTGCCCTAAAACCCACTTCACAAAACACGATTTTCAGAAGGGATTTGCTGCTGTTTGGTCTCACTTCAGTGTCTCTAACATTGCCACTTTCAGTGACTCTTGCGGAGGAAGAGCCGAAAATGGCTTCATTTTTAGATGAAACAAATGCCTATTCTTATTTGTACCCCATTGAGTTGCCGTCTGATAATTTTTCCTTCAAATGGGTAGAATCTCGAAAGCCAGAACGGTATTCATCAGCTGCACCACTTTCTCCTGATGCACGTCTGCGCATTGTGTCTGAGCGTGTTGATATTATTGATAATGCCATCATTTCTGTCACGGTAGGTCCTCCAAATTCCCGCTTTATAAAATTGAAGGATAAGAGCAAATGGAGTGCAAAAGATGTTGCTGATTCAGTTTTAGCTGACAGATCTTCACTGCGAGTTACCTCAAGTCAGCGCTTAGCAGAGAGTTCAGTTCTTAATACCCATTCTGGTGAAATTGATGGTGAACCTTACTGGTATTATGAATACCTTGTTCGCAAAGCTCCTATGAGAATTACTGATGAATCAAGCGTTTACCGGCATTATCTTGCTTCAACTGCTGAAAGAGACGGTTATTTGTATTCTGTCAGTGCTTCAACCATCAGCCCACGTTGGGAAAAATTGGGCCCTTTCCTTGAAAAAACGGTGAGTTCGTTTCGACTTCTTAGCCCCACAGAAAATTATGTTCCTCCATACAAAGATCCCTGGAGATTTTGGTGA 867 0.4302 MVLHSSTLSFFSTPILLPNRSRVILNQHKCPLSEETPPFSCRALKPTSQNTIFRRDLLLFGLTSVSLTLPLSVTLAEEEPKMASFLDETNAYSYLYPIELPSDNFSFKWVESRKPERYSSAAPLSPDARLRIVSERVDIIDNAIISVTVGPPNSRFIKLKDKSKWSAKDVADSVLADRSSLRVTSSQRLAESSVLNTHSGEIDGEPYWYYEYLVRKAPMRITDESSVYRHYLASTAERDGYLYSVSASTISPRWEKLGPFLEKTVSSFRLLSPTENYVPPYKDPWRFW* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1210 288 PANTHER - 19 288 - -
Apr5g1210 288 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 5, CHLOROPLASTIC 19 288 - -
Apr5g1210 288 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 70 270 - -
Apr5g1210 288 Pfam PsbP 83 269 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Apr5g1210 288 SUPERFAMILY Mog1p/PsbP-like 84 270 IPR016123 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1210 - - gmx:100809891 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1210 5 16579794 16584641 Apr5g1210 5 16579794 16584641 ECH