Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1208 ATGGTTGGAGGCGGAAGCAGGAGGGAGGAAGGTTCGTTGATGTTGAACAACACGAACGTGTTTGCGGCGCTCGATACTCTGAAGAAGAAGAAGAAGTCCGATAAGGAGCGAAAGAGCAAAGGTTCTTCCACGAAATCGCAAGGTGAATCCACCAAAACGGAATCGCAAGTGTTTTGGGCGCCAGCGCCGTTGAACGCGAAATCTTGGGCCGATGTTGACGATGACGATGACTATTTCGCCACCACTGCACCGCCTCAGTCCGTTTGGAGCGTTCCCGAGACTCATCAGAGTAAGGACAAACATGGAAGTTTTGAGGATAGCGAGAGCGAGGAAGATATTTTGGATGAAGGGGACGATGAGGTGGAGGAAGAGCATGATCATGAACCAGAGTATGCTGTGAAACCTGAACCCGAAGTTAAGAAGCAACCTGAAGTTTCTGCACCACCAAAGGAGGCAGAACGGCAGCTCTCTAAAAAGGAAAGGAAGAAGAAGGAGCTTGCAGAGCTTGAGGCTCTTCTAGCTGATTTTGGAGTAACACCAAAACAAAGTAACGATGGTCAAGATGAGTCGCAAGGTGCATCTCAGGATAAGAAAGGAGTTGAGACTGATGCAGATGGAGAAAAGAAAGAAAACATCACTGCAGAGTCTAAAAATGCTAAGAAGAAGAAAAAGAAGGACAAAGCTTCCAAGGAGGTGAAAGAATCTCAAGATCAATCCAACACATCAGACACAAACAATGGGCCTGATTTGGCTCCAGGCACTGAAAATGTGGAAGAGGATACACCTACTGTGGATGTGAAAGAGCGTCTTAAGAAGGTTGCTTCTACAAAGAAGAAGAAATCTAGTAAAGAAATGGATGGTGCTGCAAGAGCTGCTGCTCAAGAGGCTGCTGCGAGGAGTGCAAGGCTTGCTGCAGCGAAGAAAAAGGAGAAGAACCATTATAACCAGCAGCCTGTGCGGTAA 963 0.4714 MVGGGSRREEGSLMLNNTNVFAALDTLKKKKKSDKERKSKGSSTKSQGESTKTESQVFWAPAPLNAKSWADVDDDDDYFATTAPPQSVWSVPETHQSKDKHGSFEDSESEEDILDEGDDEVEEEHDHEPEYAVKPEPEVKKQPEVSAPPKEAERQLSKKERKKKELAELEALLADFGVTPKQSNDGQDESQGASQDKKGVETDADGEKKENITAESKNAKKKKKKDKASKEVKESQDQSNTSDTNNGPDLAPGTENVEEDTPTVDVKERLKKVASTKKKKSSKEMDGAARAAAQEAAARSARLAAAKKKEKNHYNQQPVR* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1208 320 PANTHER EXPRESSED PROTEIN 1 320 - -
Apr5g1208 320 Coils Coil 218 238 - -
Apr5g1208 320 Coils Coil 152 172 - -
Apr5g1208 320 MobiDBLite consensus disorder prediction 26 320 - -
Apr5g1208 320 MobiDBLite consensus disorder prediction 302 320 - -
Apr5g1208 320 MobiDBLite consensus disorder prediction 26 43 - -
Apr5g1208 320 MobiDBLite consensus disorder prediction 191 219 - -
Apr5g1208 320 MobiDBLite consensus disorder prediction 127 170 - -
Apr5g1208 320 MobiDBLite consensus disorder prediction 108 126 - -
Apr5g1208 320 PANTHER EXPRESSED PROTEIN 1 320 - -
Apr5g1208 320 MobiDBLite consensus disorder prediction 44 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1208 Apr-Chr5 16548054 16551803 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1208 - - ccaj:109807715 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1208 5 16548054 16551803 Apr5g1208 5 16548054 16551803 ECH