Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1203 ATGCCGAGAATGGAGGACATTCTGAACCTTCCAGTGCAAGACCCTCTTTGTTCTGAATTTTCTGCTGCTCATATAAATTGGGTTAAATTGGAAGGTGGTCGCCAAGGTGGTGATGATATTGCTCTTATTCCTTTCGCCAGAGTTGATGATTTTGTAAAAGGGGAATCTTCTAACCCCGAATGCCCTGCTAGCTTTCGCATTGAATCAAGAAGGAAGAGACCTGTTGGAAGCATTGCCAAACCAAGGGTTGATGGCTATCTTGAATATACACTATATTGGTGTTCTTACGGTCCTGAAGACTACCGAGAGAGTGACTCGGGTGTAGGGGATGGCACGAGCACCAAACCTGCTTCTGGGAAGGGAAGCAGGCCGGGGAGGCGTCACATGATGAGAGGATGCCTTTGCCATTTTACTGTTAAGAGATTGTACACCCGACCGCTACTTGCACTAATCATTTATAACCAAAGAAGGCATGTAGATAAATCAGGGGCACCATGTCATGGATTACTTGACAGGGATGCCGTAGGGACGAGAGCTATGTATGCTCTGCGAATTTCAGATGAGTTGCGTCAGAAAGTGATGTCTATGCTTTATGTTGGAATAACTATGGACAATATAATACAACATCATGCAGAGGTGAAGCAGAAGCAAGGTGGGCCCCAAAACCGTGATGATTTTCTCACTCGAAATGATGTGCGTAACATGGAAAGGACTATTCGAAATTCTTCACATGAGCTACATGTAAATGATGAATGCAGTGTAAAGATGTGGGTTCAGCGCCATCAGAAGCATGTTTTTTATTTCCAAGACAGTTCAGAATCATTTGTGTTGGGTTTACAGACAGATTGGCAACTGCAACAAATGCTTCGTTACGGAAATAATAGTTTCATTTCTTTTCATTCAAATTTTGGCTCGAAGAAGCTTAAGTATCCCATATGTTCTTTACTTGTTTTCGATTCATCAAAAAATTCAATTCCTGTTGCTTGGATCATCACCTCATCTTTTGTTGGTAAAGATATTCATAAATGGATTGTATTGCTATCTGAAAGATTACGAACCAAGGACCCAAGATGGAGGCCTAATGCTATTTTGTTGGATGATCCTTCTTTTGACTATTCTATCATAAGAGAGGCTTTCCAATGTCGCATCCTGTTATGTACCTGGCATGTTCGCCGTACTTGGATAAAAAAACTTTTCAAGAAATGCTGCAACTTTGAGGTGCAGCGCGAGATGTTTAGGCACCTGGGATGGATTATGTACTGTACAAGATGTGGGCCTAATGCTATGGATGCAGTTGAAGAGCTTACGCAAATATTTGTTGACCAGTGTGCCTTCATGGACTATTTCAAGGGCCATTGGCTAGCTAGTATAGATATGTGGATTAATGCCATAAAATCACTCCCTATGACAACTCCCGAGCCACATGCTGCAATAGAATCGTATCACCTAAAATTAAAATCCATACTTTTGAAGGAGAATTATGCTAATTTCTGGCTAAGAATTGACTGGTTAATCCACACTTTAACTACTGAATTTCACGCATTATACTGGCTAGATCACTACAGTTTAGAGACTGGGTGTTTTGAGAATCAACGGGACAATTCTTTCTCCTCTAATGCTTGGTATCACGCTCTTCATATTCCAGATGTTGATGTGATACTGGATGAGCAAAATCTCCATCTTGCCAAAGTCTTATCCCAGACTGACAGAAGCCTGGTGTATACAGTTTGGAATCCTGGTTCAGAATTTTCACTTTGTGATTGTTCCTGGTCTAGGCTGGGAAACCTCTGTAAACATGTCATCAAGGTGGCAATTTTCTGTAGAAGTCGACAAGTTGCAAGACCATTATTGTCTGCTCAAGTTTATAAACAGGCTTTGCTCACCCTTCTCCATAATCCTCCTGATGATCCTTTAGTTCTTGACCATGCCATTTTACATGTGGCCCGTTTGCAACAAGACATTAAGGCCTTGGAAGACTTGTCCAATAGTGGATTGCTCCAGCCCATAGCTCCTGATATAAGTTCTCAAATGGCTGAGAATTCTCTGCTTTTTCAGCGCATCCAGTGA 2067 0.417 MPRMEDILNLPVQDPLCSEFSAAHINWVKLEGGRQGGDDIALIPFARVDDFVKGESSNPECPASFRIESRRKRPVGSIAKPRVDGYLEYTLYWCSYGPEDYRESDSGVGDGTSTKPASGKGSRPGRRHMMRGCLCHFTVKRLYTRPLLALIIYNQRRHVDKSGAPCHGLLDRDAVGTRAMYALRISDELRQKVMSMLYVGITMDNIIQHHAEVKQKQGGPQNRDDFLTRNDVRNMERTIRNSSHELHVNDECSVKMWVQRHQKHVFYFQDSSESFVLGLQTDWQLQQMLRYGNNSFISFHSNFGSKKLKYPICSLLVFDSSKNSIPVAWIITSSFVGKDIHKWIVLLSERLRTKDPRWRPNAILLDDPSFDYSIIREAFQCRILLCTWHVRRTWIKKLFKKCCNFEVQREMFRHLGWIMYCTRCGPNAMDAVEELTQIFVDQCAFMDYFKGHWLASIDMWINAIKSLPMTTPEPHAAIESYHLKLKSILLKENYANFWLRIDWLIHTLTTEFHALYWLDHYSLETGCFENQRDNSFSSNAWYHALHIPDVDVILDEQNLHLAKVLSQTDRSLVYTVWNPGSEFSLCDCSWSRLGNLCKHVIKVAIFCRSRQVARPLLSAQVYKQALLTLLHNPPDDPLVLDHAILHVARLQQDIKALEDLSNSGLLQPIAPDISSQMAENSLLFQRIQ* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1203 688 Coils Coil 640 660 - -
Apr5g1203 688 MobiDBLite consensus disorder prediction 104 126 - -
Apr5g1203 688 PANTHER ZINC ION BINDING PROTEIN 1 687 - -
Apr5g1203 688 ProSiteProfiles Zinc finger SWIM-type profile. 574 608 IPR007527 GO:0008270
Apr5g1203 688 PANTHER ZINC ION-BINDING PROTEIN 1 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1203 Apr-Chr5 16498752 16502300 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1203 - - gmx:100779025 1324.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1203 5 16498752 16502300 Apr5g1203 5 16498752 16502300 ECH