Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1201 ATGCTGAGGAAGAGGAATAGGTCAGTGCAGAAGGATCAACACCACATGAATCATCCGACAATTTCTGATGCCAATTTGGAGTACTATTCTCAATCTCATCATGCTTTGGGGCGCAACATCATCAAAGGCCACTCAATTTTCAATGTCCCTTGTCTTTTTGTGGGTCTTGGTCCTAAAGGGTTGGATTCTGATGCAGTTAGGAGCCCCACTTCTCCACTTGATGCTAGAGGTCTTTCAAATCTAGGCAACCCTGTTAGAAAACCAAGATCATCACCCAATGAGGGGCACCAAAGGAGTTGGGATTGCTGCAAAGTAGGTCTAAGCATTGTAGAGTCTTTGGAAGACTGTTCTAGGTTTTGTGGGAAAATTCTCCAGTCACCAGAGAGCAAGAAAATTAGTCTCAGTTCCCAAATGATGATCAAAACCACAAATTGTCAAACCTATAATAGGGATTCTTTAGAGGCATCTAAGTCTTTACCAAAAGATTTTTGTAAGGTTCCTTATACCCAAAATGGATCCGTTATCCACAAGGGTGAACCTGAATCCACTGTTCTTTTTGAGATTGGAGAAACCTGCCAGGACCATGAGCTATTTGGGAGAACCCGGTCCTGTTCATTGGACTCTTGTAGTCCACTGAAAACTCTCTCTGGCTTAACCAAGTCGGATTCAGACATTGATAATTTTGCTTTGAAAGACATGAACATCCTAGTGAGCTCTCCTCCTCATTTTATTGGGGGAAGCCAGAACTCAAATACCTTCCCTCCTTCAAAGTTGAATTCAAACACTCTTTCCATTTGCTCTTCCAATGAATTTCTTAAGTCTCTTTCAGCTAGTGATATTGAACACTCTGAGGATTACACATGTGTGATTTCCCATGGCCCCAATCCCAAAACCACTCATATTTTTGGTGATTGCATCTTGGAGACTCATTCTAATGCATTTAAAAACCATTTCAAGAATGAAGAGAAGGAAGTGAATCCTGGAGGTGACAGGTTAGAGAGTCCAAATCCAAACCCATATCCCTCAAGTGACTTCTTAAGTTTCTGCCACCATTGCAACAGGAAACTAGAAGACGGGAAAGACATTTATATTTATGGGGGTGAAAAGGCATTTTGCAGTTTAACTTGCCGAGCCATGGAGATCATGATTGATGAGGAGCTAGAGGAATCGACCCCTTCTTCTGAAAACTATCCAAAGCCAAAATTTGGTGAGCAACTTTTTGAAACAGGCATCCTCACAGCTACATAA 1248 0.4175 MLRKRNRSVQKDQHHMNHPTISDANLEYYSQSHHALGRNIIKGHSIFNVPCLFVGLGPKGLDSDAVRSPTSPLDARGLSNLGNPVRKPRSSPNEGHQRSWDCCKVGLSIVESLEDCSRFCGKILQSPESKKISLSSQMMIKTTNCQTYNRDSLEASKSLPKDFCKVPYTQNGSVIHKGEPESTVLFEIGETCQDHELFGRTRSCSLDSCSPLKTLSGLTKSDSDIDNFALKDMNILVSSPPHFIGGSQNSNTFPPSKLNSNTLSICSSNEFLKSLSASDIEHSEDYTCVISHGPNPKTTHIFGDCILETHSNAFKNHFKNEEKEVNPGGDRLESPNPNPYPSSDFLSFCHHCNRKLEDGKDIYIYGGEKAFCSLTCRAMEIMIDEELEESTPSSENYPKPKFGEQLFETGILTAT* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1201 415 Pfam zinc-finger of the FCS-type, C2-C2 338 386 IPR007650 -
Apr5g1201 415 PANTHER FCS-LIKE ZINC FINGER 11 1 409 IPR044585 -
Apr5g1201 415 PANTHER DUF581 FAMILY PROTEIN 1 409 - -
Apr5g1201 415 MobiDBLite consensus disorder prediction 64 98 - -
Apr5g1201 415 MobiDBLite consensus disorder prediction 1 23 - -
Apr5g1201 415 ProSiteProfiles Zinc finger FLZ-type profile. 344 388 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1201 Apr-Chr5 16485495 16487746 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1201 - - gmx:100779553 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1201 5 16485495 16487746 Apr5g1201 5 16485495 16487746 ECH
Apr9g0132 9 1563476 1566026 Apr5g1201 5 16485495 16487746 PCT