Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1198 ATGCGGGCCGCAGAAGAAGGTGGTGGCGGGGAGGAGCGAAACGCACGTGCGGAGGAAAATAATTTGGAGTTAGAAATTCTGAAGCTGCGTGGACGATGGGAACTCGCTTCTGTTCTCAATTTTTTAGATGTGTTTGGTCCAATACTTGGTAAAGACTTGAAGTTGTCAGCTGAAGAAATAGAGATCGGGCTTATTAAGCCTGATGCTTCACTTGCTAGGCTTCATATTCAGCTTTTGAAGGGAACACCACCTGTGAGTAAAATATTGGATGGTTCTGATAAATGGGTGACTGCACTCTGTAAGAAACTGTCCATGTGGTGGCCATGGGTTGCTGAGGGGAAGATTCCACTTATCCCATCTAAAGGAGAGGAGATATCCAAGTACAAGGAGCTTGATCCATCTGATCGTTTACTATTGCTAAAAGCACTTTGTGAAGTTCGAGCTGATCAACATGATGCAGTGTCATACATCAATGATGCTTTAAAAGAAGGTTTTCAAATTTCATATTTTCGCAAAGATGCCATAGGAAGAGATGAAACTGGCACATCTTATTGGTATGACGCAAATGGGAAGGGTCATAGTCACAGATTGTACAGGGAAATTATCACATCAGACTCAAATACAAAAGATAAGGTGGAAGGATGTATGTCACTCCCTGCTATCAAATTTCAATGGGAAACACTTGCTTCCAGTCTTGAAGAATTTTCAGAAGTAGCTGAAAAATTCTCATTCAGCAAGTCAGCTGCCGAAGTTGCTGTTAGCACGAATCTTCAAAGTGATGCTATTCCTGCTCTTGAAAAGATTCAAAAGAGGAAAGATAGAGCAATAAAGCAAAAGCAAAGGCAGCACATGCTCTTAAAAGATTTTCAAAATCCTTATTGTTCTGGAAATACACGCTCTTGTCGCACTCGAAGGCCTATTAGTTATACATTTGAGGCTTACGATCGAACAATGAAGGAGGCAATACAGTTAACAAATAAAAGGAAAAAGTCTCTGGTTGCTGATCAAGGTAAAACCAAAGGATCAGAAGATAAATCCAACATAAAGGATATTTCAATAGACAGTGATTCTGAAGGGGGTGTGCTCTCGATTTTAGACGATAGTGACGACACTGGTCACGAGATTGAGAATCAAAGTAGTAGCGAGGAGGAAAATGATGATGATATCGAGAGTGAGTCGGGCAATTCGGAAGCACATTCAAGTCCTGTAGTTTCTTATCCTAAGGGTGTTCGTTGCAGCAAGCGGTTAGCTGGAGTGGCTAGCCACACTATTTTAGAAAGCAGAGGCTTAGCTACAAAGCAAAGATTGAGACAAAGACCTACTCGCAATTTTGCCGTAGAATCTATCATTATATCGGATTCCGATGACGAAGCACATGAAGGGAAGACATAA 1392 0.4138 MRAAEEGGGGEERNARAEENNLELEILKLRGRWELASVLNFLDVFGPILGKDLKLSAEEIEIGLIKPDASLARLHIQLLKGTPPVSKILDGSDKWVTALCKKLSMWWPWVAEGKIPLIPSKGEEISKYKELDPSDRLLLLKALCEVRADQHDAVSYINDALKEGFQISYFRKDAIGRDETGTSYWYDANGKGHSHRLYREIITSDSNTKDKVEGCMSLPAIKFQWETLASSLEEFSEVAEKFSFSKSAAEVAVSTNLQSDAIPALEKIQKRKDRAIKQKQRQHMLLKDFQNPYCSGNTRSCRTRRPISYTFEAYDRTMKEAIQLTNKRKKSLVADQGKTKGSEDKSNIKDISIDSDSEGGVLSILDDSDDTGHEIENQSSSEEENDDDIESESGNSEAHSSPVVSYPKGVRCSKRLAGVASHTILESRGLATKQRLRQRPTRNFAVESIIISDSDDEAHEGKT* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1198 463 MobiDBLite consensus disorder prediction 325 409 - -
Apr5g1198 463 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 21 390 - -
Apr5g1198 463 Coils Coil 12 32 - -
Apr5g1198 463 MobiDBLite consensus disorder prediction 325 352 - -
Apr5g1198 463 PANTHER REMODELING AND SPACING FACTOR 1 21 390 IPR028938 GO:0006355|GO:0031213
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1198 Apr-Chr5 16429698 16433603 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1198 - - adu:107463013 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1198 5 16429698 16433603 Apr5g1198 5 16429698 16433603 ECH