Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1194 ATGCCTCTGGGAGAAAGAGCGTGGGATAAGAGCGAATCTCGCTACTGTGGCATAGAGACGGAGTTCAACGATGACATGCCACGTGTCCTCAGTTTCAATCTCAGTTCCGGCGGCTTTGATTTCGTTATTGCTCCTCTGATGGATCCCTCTTATCGGCCAAGTTTAGTGCAAAAGGATAGTTTGGGGTCTGGTGTTCTTCCATTTGCTGGTTCAGACTTGGTCTTGAGCCCATCCCAATGGAGTAGTCATGTAGTGGGTAAAATTAGCTCATGGATAGATTTGGATTCAGAGGATGAAACCTTTAGGATAGATTCTGAAACCACTCTTAAACAAGAAATAGCCTGGGCTTCTCATCTCTCTTTACAGGCCTGCCTGCTTCCTGCCCCCAAGGGAACTTCTTGTGCTAATTATGCTAGATGTGTGAATCAAATCTTGCAGGGCTTAAATAATGTGCAGTTGTGGCTCAGGATTCCGTTAGTGAAGCCTGATGAGGACTCTATGGATGCTAAGTCCATTACTTTGGTTGACTCCTGGGAAACATGGAATTCATTTCGTTTGCTATGTGAGCATCATAGTCAGCTGTCTGTTGCACTTGATATTCTGAGTACTCTTCCTTCTGCAAATTCACTAGGACGTTGGTTTGGGGAGCCTGTTAGAGCAGCTATAATTAGTACTGATTGCTTTTTAACTAATGCTCGTGGTTGGCCATGCCTCTCCAAGCGCCACCAGAGGTTAATTACTGGTTTCTTTAACCATTCTATTCAGATCATTATATCTGGAAATTTAGTTCATCCGAAGGCAATTGTGGAAGCTAATGCTTTTCATGATAATTTAGTTTCTGTTGATAGGAGTGGAAATGTGGGCTTGGATGGTGAGGAAAGGTCTAAGGTGTGGAGAGTGTATGTACGGAGAACCAGGTCTATTTTCTGGTTTCTAACAAAAGTGAGCCTTTTTTCCACTTCAGATTCACACAGTCATCCTTTGCGGCCCTATCTAGACTATGTGGGATATCTATACCAGAAAATGGATCCACTTCCCGAGCAAGAGCGTTTTGAGCTTGGTTACAGGGATTTTTTACAGTCTCCCTTGCAACCACTTATGGATAATTTAGAGGCTCAGACTTACGAAACTTTTGAGAAGGATGCAGTAAAATACATTCAGTACCAAAGAGCAGTTAGTAAAGCACTGCTGGACAGGGTTTCTGATGAAGAGGCATCTGCTAAAACCATTGTATTGATGGTTGTTGGGGCAGGACGTGGGCCTCTTGTGCGGGCATCATTACAGGCTGCTGAAGAAACTGGACGGAAGCTAAAAGTTTATGCTGTTGAAAAAAATCCAAATGCAGTTGTTACCCTACATGCTTTAGTCAAGTTAGAGGGATGGGAGAATACTGTTACCATAGTCTCAAGTGACATGCGACATTGGGATGCCCCTGAAAAAGCTGACATATTGGTTAGTGAACTGTTAGGTTCTTTTGGCGACAATGAACTGTCTCCCGAATGCCTTGATGGAGCCCAGAGGTTTTTAAAGCAAGATGGAATTTCAATACCTTCTTTGTACACAAGTTTCCTCCAACCAGTCACAGCTTCAAAGTTATATAATGATGTTAAGGCACATAAAGACCTTGTACATTTTGAAACTGCTTATGTTGTGAAAATACACAATGTAGCCCGACTTGCACCGTCTCAACCTGTTTTTACATTTACTCATCCAAAACATTCCGATAGTGAAAGTAATCAGCGTTATAAAAAGTTGAATTTTGCGATACCTAATGACACTGGATCAGCAATGGTACATGGATTTGCTGGCTACTTTGATGCAACTCTTTACAAGGATGTTCATCTTGGAATTGAACCTTCAACAGCGACACCAAACATGTTCAGTTGGTTTGCAATATTTTTCCCATTAAGGACACCTATTTGTGTGGACCCTGGTTCTACACTTGAAGTACATTTCTGGCGCTGTTGTGGTCCTACAAAGGTTTGGTACGAGTGGAGTGTTACATCTCCGTCATCGTCGCCAATTCACAACATTAATGGACGTTCATACTGGGTTGGTCTTTAG 2064 0.4259 MPLGERAWDKSESRYCGIETEFNDDMPRVLSFNLSSGGFDFVIAPLMDPSYRPSLVQKDSLGSGVLPFAGSDLVLSPSQWSSHVVGKISSWIDLDSEDETFRIDSETTLKQEIAWASHLSLQACLLPAPKGTSCANYARCVNQILQGLNNVQLWLRIPLVKPDEDSMDAKSITLVDSWETWNSFRLLCEHHSQLSVALDILSTLPSANSLGRWFGEPVRAAIISTDCFLTNARGWPCLSKRHQRLITGFFNHSIQIIISGNLVHPKAIVEANAFHDNLVSVDRSGNVGLDGEERSKVWRVYVRRTRSIFWFLTKVSLFSTSDSHSHPLRPYLDYVGYLYQKMDPLPEQERFELGYRDFLQSPLQPLMDNLEAQTYETFEKDAVKYIQYQRAVSKALLDRVSDEEASAKTIVLMVVGAGRGPLVRASLQAAEETGRKLKVYAVEKNPNAVVTLHALVKLEGWENTVTIVSSDMRHWDAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSLYTSFLQPVTASKLYNDVKAHKDLVHFETAYVVKIHNVARLAPSQPVFTFTHPKHSDSESNQRYKKLNFAIPNDTGSAMVHGFAGYFDATLYKDVHLGIEPSTATPNMFSWFAIFFPLRTPICVDPGSTLEVHFWRCCGPTKVWYEWSVTSPSSSPIHNINGRSYWVGL* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1194 687 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 5 316 687 IPR025799 GO:0016274|GO:0018216
Apr5g1194 687 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 5 1 266 IPR025799 GO:0016274|GO:0018216
Apr5g1194 687 Gene3D - 14 348 - -
Apr5g1194 687 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 359 665 IPR025799 GO:0016274|GO:0018216
Apr5g1194 687 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 374 686 IPR029063 -
Apr5g1194 687 Pfam PRMT5 TIM barrel domain 38 341 IPR035247 -
Apr5g1194 687 Pfam PRMT5 oligomerisation domain 520 685 IPR035248 -
Apr5g1194 687 PIRSF PRMT5 3 687 IPR007857 GO:0006479|GO:0008168|GO:0035246
Apr5g1194 687 Pfam PRMT5 arginine-N-methyltransferase 347 516 IPR035075 -
Apr5g1194 687 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 316 687 - -
Apr5g1194 687 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 266 - -
Apr5g1194 687 Gene3D - 519 687 - -
Apr5g1194 687 Gene3D Vaccinia Virus protein VP39 351 518 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1194 Apr-Chr5 16378308 16390500 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1194 K02516 - gmx:100782245 1197.19