Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1192 ATGGCGGATGAGAAAGAAGTTGGGGAAGGTGAGAAGAAAGAGATGAGTGCAACTACTGGCGCTGGGAATGGAAAGAAGAAGCGCAAGGGATTCTTTTCCCGAATTTGGAATGGAATATTTAGGTTACACGGCGATGATTTTGAGAAGAGGTTGCAATACATTTCTAAAGAGGAAGCTGCAGTTATTGCTAGAATGACACGGAGATCCCGATCCTGGAGGCAATTTTCCCGCCATCTTATTGTATTCTCTATCATATTTGAGGTCGTTGCTGTAGGTTATGCTATTATGACGACAAGATCAATGGATATGAGTTGGAAAATGAGGGCAATCCGGGTTTTACCAATGTTTCTTGTGCCTGCACTGGCGTCTGCTGCTTATTCCGCATTTATCAGCTTCACAAGGATGTGTGATCGCAGGGACCAGAAAATTCTTGAAAATCTTCGAGCTGAAAGGCAAGCAAAAATTGATGAGCTCAAAGAAAAGACAAATTATTACACTACACAACAGCTCATTCAGAGATATGACCCAGACCCAGCCGCTAAAGCAGCTGCTGCAACTGTTTTGGCATCCAAGTTGGGTGCAGATTCTGGTTTGAAAGTGTATGTGGGAGATGAATCCAATCCCAGTGCTCCAATAGGGAAGAGCAATGACGTTGAACTTGTGCAGTCCACTGGACTTAGAAATCGGAAACCAATTCAATCTAGATCTACTAGTCCAGGGACAAATACACCGGATTTTGTTGATCAACAATTGGTTGGTTCGGGGGGAATGTATCAAAGTCAGACTTCTGAACATGATCAGCTTGTTGTTGAACATCACCAACCCCAAAATTCAACCACACAAGATGGAGGATGGATTGCACGAATTGCAGCTTTGCTTGTGGGTGAGGATCCAACACAGTCATATGCTCTAATATGCGGTAACTGCCATATGCATAACGGTCTAGCACGGAAGGAGGATTTCCCGTTTATCACATACTACTGCCCACATTGTCATGCATTGAACAAACCAAAGCATATGGATGAACGAATCTCTGGTCTTACTTCCCCAAATACAGGATCTGACAATGGTGAGACAGTTAAAAGTGCAACAGCATCTGTAGCAGAGAGTGTAATCACAAGCAGTAGTCCCAAAAATGCTACTAGCCCGGAGATTGAGGAAGTATCAGAAAGTGCGAGTTTGGAGCAGAAAACTGAGTAA 1200 0.4358 MADEKEVGEGEKKEMSATTGAGNGKKKRKGFFSRIWNGIFRLHGDDFEKRLQYISKEEAAVIARMTRRSRSWRQFSRHLIVFSIIFEVVAVGYAIMTTRSMDMSWKMRAIRVLPMFLVPALASAAYSAFISFTRMCDRRDQKILENLRAERQAKIDELKEKTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLKVYVGDESNPSAPIGKSNDVELVQSTGLRNRKPIQSRSTSPGTNTPDFVDQQLVGSGGMYQSQTSEHDQLVVEHHQPQNSTTQDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLARKEDFPFITYYCPHCHALNKPKHMDERISGLTSPNTGSDNGETVKSATASVAESVITSSSPKNATSPEIEEVSESASLEQKTE* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1192 399 MobiDBLite consensus disorder prediction 345 389 - -
Apr5g1192 399 MobiDBLite consensus disorder prediction 342 399 - -
Apr5g1192 399 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 14 396 - -
Apr5g1192 399 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 285 335 IPR019273 -
Apr5g1192 399 Coils Coil 141 164 - -
Apr5g1192 399 MobiDBLite consensus disorder prediction 1 26 - -
Apr5g1192 399 MobiDBLite consensus disorder prediction 227 251 - -
Apr5g1192 399 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 14 396 IPR040115 GO:0071786
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1192 Apr-Chr5 16358438 16362183 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1192 K23292 - gmx:100797087 605.52