Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1189 ATGGGTTTAAAAAGCTCTTCTCTTCTGTGCCTAACAATGATCCTTGCATTGTCTTCAACCATTCACGGTTTAGACATCACAAAACTGTTAGGGCAATACCCAGAATTTTCACTGCTCAACAAATACCTCACTGATACCAAGCTTGCAGAACAAATTAACAGTCGTATCGGCGTCACAATCCTTGCCGTCGACGACCAAGCCCTTTCCTCTCTCTCAGGCGAGTCCCTAGAAACCATTAAGGCGATTCTGAGCTCAAACATTCTCGCTAACTACTACGATGAGAAGAAGCTCGTAGAAGCTCAAGGTGCCCACTCCAAAGTGGAAACGCTGTTCCAATCCTCAGGTCTGGCGAAGAATAACCAGGGTTACATATACGTTTACTTGGTTGGCGAGGGTGCAGTGGCGTTTGGTTCTGCCGTTAACGATGAACCTACCGATGTGGAGTTGATGGGAACCGTTATGACTCAACCCGAAACCGTTTCCATTATGCATATTACTAGACCCATTGTGGCACCTGGCATTAATGCACTGACAGCTGGCATTGGAAGTGTAAAGGTAACCAAATCTGCTGCCCAGTCTCCGGTTGCCGCCGAAGCACCTGGTTCTAACAGTGGCTCTGGTCGCGTTCATGTGGGTCTCGTTGGTGCTGTTTCTGCCTTAGCTTCCCTTGTGTCCATGTTTGTGTAA 687 0.4774 MGLKSSSLLCLTMILALSSTIHGLDITKLLGQYPEFSLLNKYLTDTKLAEQINSRIGVTILAVDDQALSSLSGESLETIKAILSSNILANYYDEKKLVEAQGAHSKVETLFQSSGLAKNNQGYIYVYLVGEGAVAFGSAVNDEPTDVELMGTVMTQPETVSIMHITRPIVAPGINALTAGIGSVKVTKSAAQSPVAAEAPGSNSGSGRVHVGLVGAVSALASLVSMFV* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1189 228 ProSiteProfiles FAS1/BIgH3 domain profile. 23 154 IPR000782 -
Apr5g1189 228 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 1 188 - -
Apr5g1189 228 SUPERFAMILY FAS1 domain 23 126 IPR036378 -
Apr5g1189 228 Gene3D FAS1 domain 24 176 IPR036378 -
Apr5g1189 228 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 188 IPR033254 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1189 Apr-Chr5 16342906 16343592 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1189 - - gmx:100816826 244.973