Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1185 ATGGAAGGGGTGTCTTCTTCTTCTTCTCCTTCATCGGCGATAGCGCAGAAAACATGGGAACTAGAAAACAACATAATCCCAATGGACACTCCGGGAAGCAGCGCCCCAAGCGCCGATGACTCAATCTTCTACTATGACGAGGCCGGTCAGAACGAGTTCCAGCGCGACAAGCCATGGGCTAACGACCCTCACTACTTCAAGCGCGTCAAGATCTCCGCCCTCGCCCTCCTCAAGATGGTCGTTCACGCTCGCTCCGGCGGCACCATCGAAGTCATGGGCCTCATGCAAGGCAAGACCGACGCCGACGCCATCATCGTCATGGACGCCTTCGCTTTGCCCGTGGAGGGTACCGAAACCCGCGTCAATGCCCAAGCCGATGCCTACGAATACATGGTCGATTATTCCCAGACCAACAAGCAGGCCGGGCGGTTAGAGAATGTCGTGGGATGGTATCATTCTCATCCTGGTTATGGGTGCTGGCTTTCGGGGATTGATGTTTCGACGCAGATGCTGAATCAGCAATTTCAGGAACCCTTTCTTGCTGTTGTTATTGACCCTACGAGGACTGTTTCTGCTGGGAAGGTTGAGATTGGGGCTTTCAGGACTTACCCTGAGGGTTATAAGCCTCCTGATGAGCCTATTTCTGAGTATCAGACTATACCTCTTAATAAGATTGAGGATTTTGGTGTTCATTGTAAACAGTATTATGCGTTGGATATCACTTACTTTAAGTCCTCTCTTGATTCCCATCTCTTGGATCTGCTATGGAATAAATATTGGGTGAATACGCTGTCGTCTTCTCCTCTCTTGGGTAATGGAGATTATGTTGCTGGACAAATCTCGGATTTAGCTGAAAAGCTAGAACAAGCAGAGAATCAGTTGGCACACTCACGCTTTGGGCCACTAATAGCACCCACGCCTAGGAAGAAAGAAGAAGAATCTCCACTTGCTAAGATTACTCGTGATAGTGCAAAAATAACTGTGGAGCAAGTGCATGGTCTAATGTCACAGGTAATCAAGGACATTCTATTTAACTCCGTTCACCAAGCACACCGATCTCGCACAGAAGCATCTGGCCCTGAACCTATGATTGAAAGCTGA 1101 0.4896 MEGVSSSSSPSSAIAQKTWELENNIIPMDTPGSSAPSADDSIFYYDEAGQNEFQRDKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDADAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQAHRSRTEASGPEPMIES* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1185 366 SMART pad1_6 68 205 IPR000555 GO:0005515|GO:0008233|GO:0008237
Apr5g1185 366 Pfam Cop9 signalosome subunit 5 C-terminal domain 265 345 IPR040961 -
Apr5g1185 366 PANTHER BNAC07G13420D PROTEIN 32 356 IPR037740 GO:0004222|GO:0008180
Apr5g1185 366 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 32 356 - -
Apr5g1185 366 Gene3D Cytidine Deaminase, domain 2 7 271 - -
Apr5g1185 366 ProSiteProfiles MPN domain profile. 69 206 IPR037518 -
Apr5g1185 366 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 66 177 IPR000555 GO:0005515|GO:0008233|GO:0008237
Apr5g1185 366 SUPERFAMILY JAB1/MPN domain 68 205 - -
Apr5g1185 366 CDD MPN_RPN11_CSN5 58 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1185 Apr-Chr5 16314558 16320136 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1185 K09613 - gmx:100784909 705.671