Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1180 ATGGCAACAAAAGCAAAGGAGACTGGCATTGTAGGGAAGGAGAAGAAGGTCCAATCTTCTAATTCTCCCATCACCAGCACCAAAAAGCCCACCACCAAGTCCACACCAACCACTCCGGAAAAGCCCACATCAAGCCCATCAGTTGAAAAACAAGTCCCCAACTATCTGAAGCCCACACTTAGCTCAGTTCGTCTTGAGTCCCACTCCTTCAAACTAACCAAGAATGACGCTCTAAGTAGGGCCACTTTAAATAGAAGAAGATCTTTTGACAAACCACCATCACCTTCAAGGTTACCAAAACAAACACACCACCCTTCTCTTTCAAGACAACACAAAGCCCTTGTTTCCCCTGGCCCACGAGATAGAGCCCTACCACTTCGATCTTCAAGTGCTCCAATTAAAACTACTACTTCTACGACTAACCCTTCCAAACCCATTTCAGAGAGGCTCTCAAAGACTCCAAAAGAAGGAAAAACTCAATCACTACTTGCAAAAAGCGGTAGGAAAAGTGGCCCCAGTGTTTCTACTTCAACTACTAAGAAGGTAATAAATAGTGATCATGCTTCTGCTATCTCAACCAGCGCTACAAAGAGAAGTAGTAATGCCGAAACCACCGAAGCTACTATCAGTGTTGAAACTGAACCAGTAGTTAAAGAAGCTATAAATGAAGAGGTTGGAGAAGTTAAAGAAGCTATAGATGAAGAGGTTGAAAAAGTGGAAAATCAAAATGAACAATTGAATGAGGTTGAAAATATCCCACCTCGTTTGGTTAACTCTGAAGATGAACATGATCATGAGAATGATCAAAAGCTTGAGGAGTCTGATCAGCCTCATGTTGAAGATGATGATGACAAGGTCATTCCTACAGAGTTAAAACAAGAAGAAGAAGAAGTAAAAGAAGAGAAAAAAGAGGATGACAATACAAACCAAGATGAAAGCAACACTAACGAGAGTCATCTAGTGATTGATCATTCAATTACTGAAGAACAAGTTGAGGTAAAAGAAAAGGAAGGAGGAGAAGAAGGTGGGGTTATAACAGAAGAAGATCACCTAAGTGAATTAGGTGTGGTTAAAATAGAAGACCACAAGAATGAGATCAATAATGAGGAAGTGGTAGAGGAAGAGAAGGAAGGGGTTGAAGAAGGGACAAGTGAAGAGGTTAATAAGTTGACGGAAGAACAAGAACATGGTGAAGATGAACAAGAAGAAGCAAAAGTGGAGTCAACAAAGTCAAAGCAAATAGAAGTAGGTGGTGGAGTGCAAGGAAATAAGAAGGAGTCCCCAATATCGAATGACGTGATTGAAGAAACAGCTGGCAAGCTATTGGAGGCGAGGAAGAATAAGGTGAGAGCATTGGCTGGTGCTTTTCAAACTGTCATTGACCACCAAACCAAGTGA 1398 0.4134 MATKAKETGIVGKEKKVQSSNSPITSTKKPTTKSTPTTPEKPTSSPSVEKQVPNYLKPTLSSVRLESHSFKLTKNDALSRATLNRRRSFDKPPSPSRLPKQTHHPSLSRQHKALVSPGPRDRALPLRSSSAPIKTTTSTTNPSKPISERLSKTPKEGKTQSLLAKSGRKSGPSVSTSTTKKVINSDHASAISTSATKRSSNAETTEATISVETEPVVKEAINEEVGEVKEAIDEEVEKVENQNEQLNEVENIPPRLVNSEDEHDHENDQKLEESDQPHVEDDDDKVIPTELKQEEEEVKEEKKEDDNTNQDESNTNESHLVIDHSITEEQVEVKEKEGGEEGGVITEEDHLSELGVVKIEDHKNEINNEEVVEEEKEGVEEGTSEEVNKLTEEQEHGEDEQEEAKVESTKSKQIEVGGGVQGNKKESPISNDVIEETAGKLLEARKNKVRALAGAFQTVIDHQTK* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1180 465 MobiDBLite consensus disorder prediction 129 148 - -
Apr5g1180 465 Coils Coil 387 407 - -
Apr5g1180 465 MobiDBLite consensus disorder prediction 1 431 - -
Apr5g1180 465 Pfam Plant calmodulin-binding domain 367 460 IPR012417 GO:0005516
Apr5g1180 465 Coils Coil 291 311 - -
Apr5g1180 465 MobiDBLite consensus disorder prediction 382 410 - -
Apr5g1180 465 MobiDBLite consensus disorder prediction 322 370 - -
Apr5g1180 465 PANTHER EMB|CAB62594.1 1 464 - -
Apr5g1180 465 Coils Coil 218 252 - -
Apr5g1180 465 MobiDBLite consensus disorder prediction 217 244 - -
Apr5g1180 465 PANTHER CALMODULIN-BINDING PROTEIN-LIKE PROTEIN 1 464 - -
Apr5g1180 465 MobiDBLite consensus disorder prediction 14 79 - -
Apr5g1180 465 MobiDBLite consensus disorder prediction 255 312 - -
Apr5g1180 465 MobiDBLite consensus disorder prediction 156 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1180 Apr-Chr5 16251543 16252940 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1180 - - gmx:102660753 354.369