Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1179 ATGGCGGTGGTCGAAGGACTCAAAGAAAACAACGAGCGCGAGGAGCTTATTCCGGGGTTGCCCAACGAAATCGCAGAGCTGTGTCTTCTTCACGTGCCCTACCCTTACCAGGCTTTGGCACGCTCTGTTTCTTCGTCGTGGAACAGAGCAATAACGCACCCTTCTTTTGTCGTCTCCAAGAACACGCTCTCCAACCCACATCTCTTTGTCTTGGCATTCCACAGACAAACATCGAGGATCCAATGGCAGGCGCTGGACCCATCTTCCAAGCGTTGGTTCGTTCTGCCGCAAATGCCCTTGCCGGAGGGCGTGTGCCCCACGGCGTTCGCGTGCGCGTCGCTGCCGAAGCAGGGGAAGCTCTTCGTCATGGCGGGGATGAACTCCGACGCGGAGGCGCCAATGCGGACGGCGCTGGTCTACCGCGCCGCCACGAACCAGTGGTCGGAAGCGTCGGCGATGCCGGGGGGGAGGTCGTTCTTGGCGGCGGAGAGTGTGAACGGGAAGATCGTGGGCGTAGGGAGGAGCGGGACGGATATCTACGATGCGGAGAGCGACACGTGGAGGAGAGGAAAGGGGTTGGAAGGGGAGCTGGGTCGGTGCGAGGCCACGGTGGTAGGGGGGAGGATGTTGGTGACGGAGGGGTGGTGGTGGCCGTTCACGTTTCGACCGAGGGGGTGGTCGTACGAGGTGGAGAGGGACACGTGGCGAGAGATGGGGGTGGGAATGAGGGATGGGTGGACGGGGGTGGGAGTGGCGGTTATGGGAAGGGTGTTGGTGATTGCGGAGTATGGGGATTGCCCCGTGAAGGTGTACGACGAGGATAGTGACACGTGGCGGTGTGTGGGAGGAGACAGGTTTCCGAGGGAACAAATGCAGAGGCCATTTGCTGCGAGGGGTTTGGATGATCGTATCTACGTTGTGTCTTCGGGGTTGAATGTGGCGGTTGGGAGTGTCACTGTTAACCAGAAAGGTCGGGGTTATGGGGTGGTGGTGACGTGGCAGGTGGTGGAGGCAGCAGAGGCTTTCCGTGGTTTTTCCCCATTTAGTTGCCAGGTGTTGTATGCTTGA 1068 0.5993 MAVVEGLKENNEREELIPGLPNEIAELCLLHVPYPYQALARSVSSSWNRAITHPSFVVSKNTLSNPHLFVLAFHRQTSRIQWQALDPSSKRWFVLPQMPLPEGVCPTAFACASLPKQGKLFVMAGMNSDAEAPMRTALVYRAATNQWSEASAMPGGRSFLAAESVNGKIVGVGRSGTDIYDAESDTWRRGKGLEGELGRCEATVVGGRMLVTEGWWWPFTFRPRGWSYEVERDTWREMGVGMRDGWTGVGVAVMGRVLVIAEYGDCPVKVYDEDSDTWRCVGGDRFPREQMQRPFAARGLDDRIYVVSSGLNVAVGSVTVNQKGRGYGVVVTWQVVEAAEAFRGFSPFSCQVLYA* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1179 355 SUPERFAMILY Kelch motif 66 310 IPR015915 GO:0005515
Apr5g1179 355 SUPERFAMILY F-box domain 12 95 IPR036047 GO:0005515
Apr5g1179 355 SMART kelc_smart 119 167 IPR006652 GO:0005515
Apr5g1179 355 Pfam F-box domain 19 56 IPR001810 GO:0005515
Apr5g1179 355 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 8 355 - -
Apr5g1179 355 PANTHER F-BOX PROTEIN AFR 8 355 - -
Apr5g1179 355 SMART fbox_2 20 60 IPR001810 GO:0005515
Apr5g1179 355 Gene3D - 55 335 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1179 Apr-Chr5 16240470 16241982 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1179 - - gmx:102668990 497.278