Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1171 ATGGCTCCAAGGTTGGATTTTTCCAATTGGTGGACCAAGGATGCACAAAGAGGAACACCAGTGGTGGTGAAAATGGAGAACCCAACTTTCTCTGTTCTGGAGATCAATGGTGCTGATGCTGCATTCAAGCCAATAGAGAAGAGCCGTGGCAAGAATGCTAAGCAAGTGACATGGGTTTTGCTTCTCAGAGCTCATCGTGCTGTTGGGTGTGTCACTTGGATTGCCACTGTGCTTTGGTCTTTGCTTGGTGCCATTAAGAAGAGATTGATTCATAGACAAGATGTGACTGTGGAGAGTGAGAGTGACAAGTTGGATAAAGGCAAGTTGTTGTTTAGAGTCATTAGAGTGTTCCTAGTAACTTCCTTGACGGTTCTGGCTTTTGAGGTTGTTGCTTACTTGCAAGGTTGGCATTTTAGTAACCCCACTTTGCACATTCCTCGTACTTCTGATTTGGAGGGATTGCTCCACTTGGCTTATGTTGCTTGGTTAACATTTCGTGCTGAGTATATTGCTCCACCTATACAAGCGCTTTCCAAGTTTTGTGTTGTTTTGTTTCTTATCCAATCTGTGGATCGGATGCTTCTTTGTTTCGGGTGCTTTTGGATAAAATATAGGAAGGTTAAGCCAAGGATTGATGGGGATCCCTTCAAGATTGATGATGTTGAAGGATCTGCATGCAATTATCCCATGGTTTTGGTTCAAATTCCAATGTGCAACGAGAAGGAGGTGTATGAGCAGTCTATTTCTGCAGTCTGCCAAATTGATTGGCCTAGAGATCGTTTACTGATTCAAGTGCTTGATGATTCTAATGATGAGAGCATACAATGGTTGATTAAGGCAGAGGTCTTTAAGTGGAGCCAAAAGGGTATCAATATAATCTATAGGCACCGCTTAGTGAGGACTGGATATAAAGCTGGAAACCTTAAATCTGCAATGAGCTGTGACTATGTGAAAGACTATGAGTTTGTTGCAATATTTGATGCTGACTTTCAACCAAATCCTGATTTTCTCAAGCAAACCGTGCCACATTTCAAGGACAATCCTGAACTAGGTTTGGTCCAAGCTAGATGGTCTTTTGTGAACAAGGATGAGAATTTGTTGACTCGTCTCCAAAACATTAATCTATGCTTCCATTTTGAGGTAGAACAGCAGGTCAATGGGGTGTTTCTAAATTTCTTTGGTTTCAATGGAACTGCTGGTGTTTGGAGAATCAAAGCCTTAGAAGAATCTGGGGGCTGGTTGGAGAGGACAACTGTAGAAGATATGGACATTGCAGTCCGAGCTCATCTCAATGGTTGGAAATTTATCTTTCTAAATGATGTCAAGGTACTTTGTGAAGTGCCTGAGTCATATGAAGCTTATAGGAAGCAGCAACACCGTTGGCATTCAGGTCCCATGCAACTTTTCAGGTTGTGTCTTCCGGCAATTGTGAGATCTAAGGTATCTGCATGGAAGAAAGCAAACTTAATACTTCTATTTTTTCTGTTAAGAAAGCTGATCCTTCCCTTTTACTCCTTCACTCTATTTTGCATAATTCTTCCTTTAACCATGTTTGTCCCAGAGGCTGAACTTCCTCTATGGGTGATCTGCTATGTGCCTGTATTTATGTCATTCCTTAACATTCTTCCTGCCCCAAAATCTTTTCCTTTCATTGTTCCCTACCTCCTTTTTGAAAATACCATGTCTGTCACCAAATTCAATGCAATGGTATCTGGTCTCTTCCAATTGGGAAGCTCTTATGAATGGGTTGTCACAAAGAAAGCTGGCAGGTCATCAGAGTCTGATTTACTGTCTGCTGCTGAAAGGGAAACCGAGTCAATAGAACAACAAAAGATGCATAGAGGAGCTTCTGACAGTGAACTTATTGAGTCACACCAATTAAAGGAACACAAAGAAGCAGCTTCAGTAGCTGTTAAGAAAACCAATAAGATATATAAGAAAGAGTTGACTTTGGCATTCCTCCTTCTCACAGCTTCTGTGAGGAGTCTGTTAACTGCACAAGGAGTTCACTTTTACTTTCTGCTTTTCCAAGGGGTGACCTTCCTCCTTGTGGGGCTTGATTTGATTGGAGAACAGATGAGCTAG 2085 0.4168 MAPRLDFSNWWTKDAQRGTPVVVKMENPTFSVLEINGADAAFKPIEKSRGKNAKQVTWVLLLRAHRAVGCVTWIATVLWSLLGAIKKRLIHRQDVTVESESDKLDKGKLLFRVIRVFLVTSLTVLAFEVVAYLQGWHFSNPTLHIPRTSDLEGLLHLAYVAWLTFRAEYIAPPIQALSKFCVVLFLIQSVDRMLLCFGCFWIKYRKVKPRIDGDPFKIDDVEGSACNYPMVLVQIPMCNEKEVYEQSISAVCQIDWPRDRLLIQVLDDSNDESIQWLIKAEVFKWSQKGINIIYRHRLVRTGYKAGNLKSAMSCDYVKDYEFVAIFDADFQPNPDFLKQTVPHFKDNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIVRSKVSAWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPLWVICYVPVFMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWVVTKKAGRSSESDLLSAAERETESIEQQKMHRGASDSELIESHQLKEHKEAASVAVKKTNKIYKKELTLAFLLLTASVRSLLTAQGVHFYFLLFQGVTFLLVGLDLIGEQMS* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1171 694 Pfam Glycosyl transferase family group 2 323 529 IPR001173 -
Apr5g1171 694 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 5-RELATED 1 694 - -
Apr5g1171 694 PANTHER - 1 694 - -
Apr5g1171 694 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 509 IPR029044 -
Apr5g1171 694 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 222 448 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1171 Apr-Chr5 16181282 16185166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1171 1 694 Miscellaneous Gene Families AT4G31590 80.775 0.0 1142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1171 - - gmx:100790397 1301.58