Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1170 ATGGAGATCCGTGCCGATGCAGATACCAGTTCCTTTTCGAGTTTGTTCGCAGCTGTGTCGTATGGAATTGCCTCAATGGCCATGGTTTTTATCAATAAGGCTGTTCTTATGCAGTATGCACACTCAATGACTCTCCTCACTTTGCAGCAACTCGCTACCACCTTGCTTATACACTTTGGTAGAACAATGGGATACACAAAAGCGAGAGGAGTGGATATGACGACGGCGAAGCAACTGCTTCCTGTTTCAATTTTCTATAATGCCAATGTTGCTTTTGCCTTGGCAAGTTTGAAAGGAGTCAATATCCCAATGTATATTGCAATTAAAAGGCTTACGCCTCTTGCTGTACTTATTGCTGGGTGTTTCTCTGGAAAAGGGAGACCTACAACTCAGGTGACTCTTTCAGTGTTATTGACTGCTGCTGGAGTTCTCATTGCTGCCCTTGGAGATTTTTCCTTTGACCTTTTTGGGTACAGCATGGCCTTCGTTTCTGTCTTTTTCCAGACCATGTACCTTGTGCTGGTGGAAAAATCTGGAGCTGAGGACGGACTTTCATCTGTGGAAATTATGTTCTATAACAGTTTTTTATCTCTTCCATTTTTGATGTTTCTCATCATAGCCACTGGGGAATTCCCATATTCTTTATCAGTATTATTTGCAAAGAGTTATTCTTTTTCATTTTTGGTGATCCTTATTCTTTCGTTGGTGATGGGCATCGTTCTCAACTTCACCATGTTCTTGTGTACAATCGTTAATTCAGCTTTAACTACAACTATTGTTGGCGTTCTCAAGGGTGTTGGTTCCACGACCCTTGGTTTTGTCTTACTGGGTGGTGTTCAAGTCCAAGCTTTGAATGTGACTGGATTGGTTATCAATACTGCTGGTGGGGTGTGGTACTCATACGCTAAATATCAGCAGAAAAAAAATAAGACGGTGAAGCCAGTAACAGATGCGGAGGCGGCTCATCGTAGATAG 975 0.4236 MEIRADADTSSFSSLFAAVSYGIASMAMVFINKAVLMQYAHSMTLLTLQQLATTLLIHFGRTMGYTKARGVDMTTAKQLLPVSIFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLIAGCFSGKGRPTTQVTLSVLLTAAGVLIAALGDFSFDLFGYSMAFVSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLMFLIIATGEFPYSLSVLFAKSYSFSFLVILILSLVMGIVLNFTMFLCTIVNSALTTTIVGVLKGVGSTTLGFVLLGGVQVQALNVTGLVINTAGGVWYSYAKYQQKKNKTVKPVTDAEAAHRR* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1170 324 PANTHER JC8.12-LIKE PROTEIN 12 305 - -
Apr5g1170 324 PANTHER SOLUTE CARRIER FAMILY 35 12 305 - -
Apr5g1170 324 Pfam Triose-phosphate Transporter family 24 300 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1170 Apr-Chr5 16172296 16175968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1170 76 318 Organic Solute Cotransporters AT3G17430 25.200 3.00e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1170 K15281 - gmx:100777622 539.65