Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1167 ATGGCAGGGTTAAATTTTGAAGCCACATATACTGACAGCCATGATATTCTGAAGATATTTGCAGCTGAAGGTGTTGAGTTCCTTTTATCTTGTGAAGGGAAGGTACCCTTGTCTGAATGCAGTGGGCAAATCATCTGCCTATTTTTCACTGCAAACTGGTGCAGGCCTTGCAGAGCTTTTGTTCCCCGTCTTGTTGAACTTTATGAAACACTGAGAAGAAAGGGAATAAATCTAGAGATCATCTTCATCTCCTTTGATCGTGATGAGGATGGATTCAAAGAACACTTCAAGAGTATGCCATGGCTAGCCGTTCCATTTGATGTAAATTTGCATAGAAGACTGATTGACAGATACAGAGTTGATCGAATCCCATCATTCCTTCCATTATGTTCTGATGGCATAACTGTTGAAGAAGACTTGATTGGATGCATTGAGGATTATGGTGCCGATTCATTTCCTTTCACAAGGAAGAGGCATGAGGAATTGAAAGCCATAGATAAAAGAAAACACGAGCAAGCAAATTTGGAAGAATTATTGGCACATGAAGGCCGTGACTTTCTAATCTCTGGAGATGATAGAAAGGTACCCATATCTGAACTAGCTGGTAAAACTATAGGCCTATATTTTGGTGCCTATTGGTCTCCTCCATGCTGTGCCTTCACTGTCCAACTTACAGATGCATACAATAATCTCAAGGCTGAAAAAGGCCATTGCTTCGAGATTGTTTTAGTGTCAACAGATAGGGATCCTGAAGAATTCAATGTCAACAAAAGTAGTATGCCATGGCTTGCTATTCCGTATGAGGACAGGACAAGGCATGATCTTCGAAGAATCTTTGACATTAAGGAAATTCCTGCTTTGGTTCTTATCGGAGCAGATGGGAAAGTTGTTAGTGAGAATGGGAAGTTCATGATTTCCTCATATGGTGCAGAAGCTTTCCCATTTACTGAATCGCGGATAAGAGAGCTAGAGGCAGCTCTGAGAAAGGAAGGAGAGGCTTTGCCTCAACAGGTTGAGGATGTCAAGCATGAACATGTACTGAAATTGGATATGGCCAAAGCATATGTATGTGATTCCTGTAAAAACCAAGGCAAGTTCTGGACATTCTCCTGTGATGTCTGTGATTATGACCTTCACCCAAGTTGTCTAGAAAAGGTCAACAATGACTAA 1170 0.412 MAGLNFEATYTDSHDILKIFAAEGVEFLLSCEGKVPLSECSGQIICLFFTANWCRPCRAFVPRLVELYETLRRKGINLEIIFISFDRDEDGFKEHFKSMPWLAVPFDVNLHRRLIDRYRVDRIPSFLPLCSDGITVEEDLIGCIEDYGADSFPFTRKRHEELKAIDKRKHEQANLEELLAHEGRDFLISGDDRKVPISELAGKTIGLYFGAYWSPPCCAFTVQLTDAYNNLKAEKGHCFEIVLVSTDRDPEEFNVNKSSMPWLAIPYEDRTRHDLRRIFDIKEIPALVLIGADGKVVSENGKFMISSYGAEAFPFTESRIRELEAALRKEGEALPQQVEDVKHEHVLKLDMAKAYVCDSCKNQGKFWTFSCDVCDYDLHPSCLEKVNND* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1167 389 SUPERFAMILY Thioredoxin-like 189 298 IPR036249 -
Apr5g1167 389 ProSiteProfiles Thioredoxin domain profile. 16 170 IPR013766 -
Apr5g1167 389 Pfam Thioredoxin-like 202 296 IPR012336 -
Apr5g1167 389 Pfam Thioredoxin-like 42 127 IPR012336 -
Apr5g1167 389 Gene3D Glutaredoxin 21 158 - -
Apr5g1167 389 SUPERFAMILY Thioredoxin-like 34 145 IPR036249 -
Apr5g1167 389 PANTHER THIOREDOXIN 1 385 - -
Apr5g1167 389 ProSiteProfiles Thioredoxin domain profile. 177 325 IPR013766 -
Apr5g1167 389 CDD TryX_like_TryX_NRX 185 315 IPR045870 GO:0004791
Apr5g1167 389 PANTHER NUCLEOREDOXIN 3-RELATED 1 385 - -
Apr5g1167 389 Pfam C1 domain 342 382 IPR004146 -
Apr5g1167 389 Gene3D Glutaredoxin 178 317 - -
Apr5g1167 389 SUPERFAMILY Cysteine-rich domain 334 383 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1167 Apr-Chr5 16151482 16154361 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1167 K17609 - gmx:100778160 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1167 5 16151482 16154361 Apr5g1167 5 16151482 16154361 ECH