Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1166 ATGGCGAGAGTGTGCTTCTCTTCGACGTTCCCGCGCGCGCTCCATTTCGTGATTCACCGTCACTCTCCCTCCTCCATTTCGCTGCTTCTAAACTCCCTTCACTTTAAAATTAACGGGAGAAGGGAACGGTCTGTGACTGGTATTGTTAGGGCTTTTCAATCTTTCTCTGCTAAACCTATGAGTTGGTGGGAAGACGTTCAGGAACCTCGGGTTCTCGTCGCTCCCGATCCTGGTACAAATGGAAACGGTTTGGGAGATATGATATTGCTCCGCCATCCCAAATCTGGAAATGGAACACAATATCTGTTTGTAAATGGAGTGCTTCAAGAACTTCAATGGTTTAAGAACTTGTATGGATCTTGGTTTTTGGGTGATTATATAAGTGAAGATGGTCGGCTGTATTTATCCACACCAATTGATCCTGTTTTCATTATGTTGCCTATATTTGAGGATGCTAGAATGAAGAAAGGGGATGATCTTGGGAAGTTCAGGCAATTGGATGAGATCTTGTTTATTGATGGGTATCCTGGCTATCAGCAATTATTGTCTGTTGTGGAGAACTGCATGCAAGTAGTTTGCGAAGTCAAAGAAGTAGGATCCTTAAAATTCTTCAGACTTGATGACTCAAAGGTTCTACGTTGGCTGTGCTATAAGGTTTATCAGCTGAAACAGACACTACCCAAATTAGACAAAAACTATGCTGTTCAATCAGAGAAAGACACATTGATTGATGCGGTCTCTATTTTAGGAGAGTATTTGAAGGAAGAGCCTTGGTTGCAGCTTTTGTGTAAGCATCTCAAGTTAAATATACTTGATGTTACCGGAAAAACACAAGTAAATGCTGAAGGAAGTAACTCAGGTTTATGTAATGAATTACAGGAACGGAGTGATAAGAAGGTTGCAGTTGCAAAGAAAGGTAGACAAACAAAGAAGGTAAAATTGGAGACAGAATCACATAACATCAAGGATATGTTTTCGAGGGCCTCCCGAAAGAAAAGTTAA 1002 0.4112 MARVCFSSTFPRALHFVIHRHSPSSISLLLNSLHFKINGRRERSVTGIVRAFQSFSAKPMSWWEDVQEPRVLVAPDPGTNGNGLGDMILLRHPKSGNGTQYLFVNGVLQELQWFKNLYGSWFLGDYISEDGRLYLSTPIDPVFIMLPIFEDARMKKGDDLGKFRQLDEILFIDGYPGYQQLLSVVENCMQVVCEVKEVGSLKFFRLDDSKVLRWLCYKVYQLKQTLPKLDKNYAVQSEKDTLIDAVSILGEYLKEEPWLQLLCKHLKLNILDVTGKTQVNAEGSNSGLCNELQERSDKKVAVAKKGRQTKKVKLETESHNIKDMFSRASRKKS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1166 333 Pfam Ydr279p protein family (RNase H2 complex component) wHTH domain 143 230 IPR019024 -
Apr5g1166 333 Gene3D - 139 267 - -
Apr5g1166 333 PANTHER RIBONUCLEASE H2 SUBUNIT B 56 332 IPR040456 GO:0032299
Apr5g1166 333 Pfam Ydr279p protein triple barrel domain 87 140 IPR041195 -
Apr5g1166 333 Gene3D - 69 138 - -
Apr5g1166 333 CDD RNase_H2-B 71 224 IPR040456 GO:0032299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1166 K10744 - gmx:100792495 536.569