Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1163 ATGGTTTTCTGGGTTTTTGGCTATGGTTCACTGGTGTGGAATCCAGGATTTGATTTCGATGAAAAAATTGTCGGTTTCATTAAGGACTACAGACGCGTGTTTGATTTAGCGTGTATTGATCACCGAGGAACACCTGAAAACCCTGCAAGAACTTGCACGCTGGAGCAGAAAGAAGGGGCTATTTGCTGGGGCGCTGCTTATTGTGTTCGAGGTGGCCCTGAAAAGGAAAAACTGGCGATGCAGTATTTGGAGCGGCGTGAATGTGAATATGATCAAAAGACTCTTGTAAACTTCTTCAAGGAAGGAGATTCAGTGCACCCTGCTTTAACTGGAGTAATAGTATTCACATCTACTCCAGACAAAGAGAACAACAAATACTACCTGGGTCCTGCCCCGCTGGATTACATGGCTAGGCAAATAGCAACCGCTTATGGCCCTTGCGGAAACAACAGGGACTATATTTTCCTTCTTGAAAAAGCCATGCATGATATTGGCCATGAGGACGACTTAGTGATAGAGCTTGCTAATGAAGTGAGGAAAGTACTTGGAGTGGGAAATGTACTACCAAAGGACAAGAAATTGGTTGGACCAGCACAGCTTCAACACCCTTCACATTTACCAATCTCTGCCCTTCAACTGCACCCACTGCCAGAACCTATTGCGTTGGATAGTTGA 675 0.4504 MVFWVFGYGSLVWNPGFDFDEKIVGFIKDYRRVFDLACIDHRGTPENPARTCTLEQKEGAICWGAAYCVRGGPEKEKLAMQYLERRECEYDQKTLVNFFKEGDSVHPALTGVIVFTSTPDKENNKYYLGPAPLDYMARQIATAYGPCGNNRDYIFLLEKAMHDIGHEDDLVIELANEVRKVLGVGNVLPKDKKLVGPAQLQHPSHLPISALQLHPLPEPIALDS* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1163 224 CDD GGCT_like 5 110 IPR013024 -
Apr5g1163 224 PANTHER GAMMA-GLUTAMYLCYCLOTRANSFERASE 2-2 1 224 - -
Apr5g1163 224 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 1 224 IPR006840 GO:0003839|GO:0006751
Apr5g1163 224 ProSitePatterns Glycosyl hydrolases family 5 signature. 170 179 IPR018087 GO:0004553|GO:0005975
Apr5g1163 224 Gene3D - 2 180 - -
Apr5g1163 224 Pfam ChaC-like protein 4 180 IPR006840 GO:0003839|GO:0006751
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1163 Apr-Chr5 16132990 16135710 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1163 K22596 - gmx:100793027 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1163 5 16132990 16135710 Apr5g1163 5 16132990 16135710 ECH