Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1161 ATGAGCTTGAAGGTGAATTGTGGCGACACTCACAACGTCTTCGTCTATGGTAGCCTCTTAGCCGACGAGGTTGTCCACGTCCTCTTGAAGCGCGTCCCTTCAACCGCACCCGCTACCCTTCAACACTATCACAGGTTTAAGATCAAGGATCGCGTTTATCCCACTATACTCCCTGTTCAGAATAAGAAAGTTACTGGCAGGGTGCTTCTTGATATCTCGGGTGTGGAGTTGGATATTTTAGATGAGTTCGAGGATGTTGAATATACAAGAAGAGATGTTGAGCAAAATTCTGAGAAGTTGCGAGTTCATGCTTATGTTTGGAGCAACCCAAATGATCCTAACTTGTATGGAGAGTGGGATTTTGAGGAATGGAAACAAGTTCACAAGAATGATTTCGTCCAGATGACTAATAGCTTCGTGCAAGAGTTGGAATTGCCAGAATCAAAGCCTAGAGTGCAGACTTATGAAGCCTTCTATAAGCAAGAAAACGATAAGCCACTTGAGCCTTGA 510 0.4412 MSLKVNCGDTHNVFVYGSLLADEVVHVLLKRVPSTAPATLQHYHRFKIKDRVYPTILPVQNKKVTGRVLLDISGVELDILDEFEDVEYTRRDVEQNSEKLRVHAYVWSNPNDPNLYGEWDFEEWKQVHKNDFVQMTNSFVQELELPESKPRVQTYEAFYKQENDKPLEP* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1161 169 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 10 128 IPR036568 -
Apr5g1161 169 CDD GGCT_like 13 107 IPR013024 -
Apr5g1161 169 Pfam Gamma-glutamyl cyclotransferase, AIG2-like 13 120 IPR009288 -
Apr5g1161 169 PANTHER AIG2-LIKE PROTEIN 5 148 - -
Apr5g1161 169 PANTHER AIG2-LIKE PROTEIN D 5 148 IPR045038 -
Apr5g1161 169 Gene3D - 2 113 - -
Apr5g1161 169 Gene3D - 114 163 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1161 - - gmx:100527521 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1161 5 16124810 16126444 Apr5g1161 5 16124810 16126444 ECH