Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1160 ATGGCAACCATCATGTCTGATCAACCAAGAACTGCAGGGTCTTATTCCTATGGAACCACTACCTATGACACCAACAACAACCCATCTTCACGCCAAACCGTTAAGTTCATAACTGCTGCCACTATTGGTGTCACCCTCTTGCTCTTGTCTGGGTTAATCCTCACAGGGACTGTTATAGGCTTAATCATTGCAACTCCACTTCTTGTTCTCTTTAGTCCTATCCTTGTTCCTGCTGCCATTGTGCTGTTCCTAGCTGCCTCTGGCTTCTTGTTCTCAGGTGGGTGTGGCGTGGCTGCAATTGCTGCTTTGTCTTGGATTTACAACTATGTGTCTGGGAACCACCCTGCAGGGTCTGACACCCTTGATTATGCTAGAGGGATCATTGCTGATAAGGCTAGGGATGTGAAGGAAAGGGCCAAGGATTATGGAAGCTATGGTCAGGTTAGAGCTCAGGACACCACACAAGGATCTTATTGA 477 0.4738 MATIMSDQPRTAGSYSYGTTTYDTNNNPSSRQTVKFITAATIGVTLLLLSGLILTGTVIGLIIATPLLVLFSPILVPAAIVLFLAASGFLFSGGCGVAAIAALSWIYNYVSGNHPAGSDTLDYARGIIADKARDVKERAKDYGSYGQVRAQDTTQGSY* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1160 158 PANTHER OLEOSIN 5 155 IPR000136 GO:0012511|GO:0016021
Apr5g1160 158 PANTHER OLEOSIN 5 155 - -
Apr5g1160 158 Pfam Oleosin 32 143 IPR000136 GO:0012511|GO:0016021
Apr5g1160 158 ProSitePatterns Oleosins signature. 56 78 IPR000136 GO:0012511|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1160 Apr-Chr5 16122937 16123413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1160 25 135 Lipid Metabolism Gene Families AT2G25890 66.667 2.94e-43 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1160 - - gmx:100779237 230.335