Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1152 ATGGCGCCTCCGAAGTTCTTCGTCTTCGCACTTTCAGTAACCCTAATTTTCGCCTTCGTTGTGGCCGAAGCAAGCACCGAAGAACCTGATTCCTCCGCTATCAAGATCCAATTAGATCAACTCAATTCCAAGATCCAAATTCTTGAGTCTCAAATCATTGTGAAGTCCGAAGAAGTGAAGAAGAAGGACGAAGTTATAGCAGACAAGGAAAAACTCATTCAAGATAAACTGGGAACCATTGAATCACTGCAGAATGAGATTGCTTCACTCCAGAAAAAAGGGACATTGGATGCTGAGGAGCAGGTTGGAAAGGCTCATGCACGTGCTGGTGAACTACAGAAGCAGGTTGACAAGCTTCAAAGGGAACTAGAAACACAAAACAAGGAGAAAGTGAACTGGGAAACTCGGGTAGTTGAGTTAGAGAAAAAGATTGATGACTTGAACTCAAAATTAGAACATGTTCAAAAGATAAATGAGGAACAGAAGATAAAAATTCGTAAAACTGAACGTGCTCTTAATGTTGCTGAGGAAGAAATGATTAAGGCAAAGTTTGAGGCAACTTATAAAGAAAAAGAGCTAAGGGAGGCTCATGGTGCTTGGCTTCCACCTTGGCTTGCTGTACACTATATTCATAGTAAGTCCTTGGTTGAGAATCACTGGAATAAACATGGGAAACCTGCTTTGGAAGTGTTTACTCAGAAGGCCATGGAGAAAAAGGCACAAGTTGGAAAGTGGGCTGAACCTCATGTAGAAACCATTCAAACCAAATGGATCCCAGCTGTAAAGGAACAGTGGTCTGTGGTGAAAACAAATGCTGAACCTCATGTGCAATTATTGACTGTGAAAATTGTTGAAGCTTACGAGACATCAAAGAATACAATTTCTCCCCAATTAAGCAAGGCAAAAGAATTTGTAGATCCTTATTATCAGGAAGCTAGAAAGTTCAGCAAGCCATACATTGATCAGGTTGCTGTTGCAGCTAAACCTCATGTTGATAAAGTACAGGTGGTTTTGAAGCCCTACACAGCGAAGGTTGTTCATGCTTATGGGAAGTTTTTGGATACAGCTACTACATATCATGGCCAGGTCCAAGCTACTGTCCAGGAGACACTGAAAACGCATGAGCTTACTAGACCTCTTGCCACCAAAGAGTTGGAATGGTTTGTGGCCTCTGCCCTTTTAGCCTTGCCTATTATTTTACTGGCTAAAGTTTTTTCAGCTGTTTTCTGCAAAAAAGCGAATAAACCTGCTCGAAATGGAAACACTCACCATCCACGTCGTAAAGCTAAGCGAGTGCATCCAGACAAGTAG 1311 0.418 MAPPKFFVFALSVTLIFAFVVAEASTEEPDSSAIKIQLDQLNSKIQILESQIIVKSEEVKKKDEVIADKEKLIQDKLGTIESLQNEIASLQKKGTLDAEEQVGKAHARAGELQKQVDKLQRELETQNKEKVNWETRVVELEKKIDDLNSKLEHVQKINEEQKIKIRKTERALNVAEEEMIKAKFEATYKEKELREAHGAWLPPWLAVHYIHSKSLVENHWNKHGKPALEVFTQKAMEKKAQVGKWAEPHVETIQTKWIPAVKEQWSVVKTNAEPHVQLLTVKIVEAYETSKNTISPQLSKAKEFVDPYYQEARKFSKPYIDQVAVAAKPHVDKVQVVLKPYTAKVVHAYGKFLDTATTYHGQVQATVQETLKTHELTRPLATKELEWFVASALLALPIILLAKVFSAVFCKKANKPARNGNTHHPRRKAKRVHPDK* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1152 436 PANTHER OS08G0519400 PROTEIN 1 436 - -
Apr5g1152 436 Coils Coil 102 185 - -
Apr5g1152 436 PANTHER OS08G0519400 PROTEIN 1 436 - -
Apr5g1152 436 Coils Coil 66 93 - -
Apr5g1152 436 Gene3D - 30 201 - -
Apr5g1152 436 MobiDBLite consensus disorder prediction 417 436 - -
Apr5g1152 436 MobiDBLite consensus disorder prediction 415 436 - -
Apr5g1152 436 SUPERFAMILY Apolipoprotein A-I 227 364 - -
Apr5g1152 436 Gene3D Apolipoprotein 210 355 - -
Apr5g1152 436 SUPERFAMILY Tropomyosin 23 195 - -
Apr5g1152 436 Coils Coil 31 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1152 Apr-Chr5 16068436 16075221 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1152 - - gmx:100781922 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1152 5 16068436 16075221 Apr5g1152 5 16068436 16075221 ECH