Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1141 ATGGAGTATCCTCTCCTACCCATTTTTGCTTTACTCAACCTTGCTATGGTGGCAACCCATGCTGCCTTACCTCCAGAGATTTACTGGAAGTCCGTGCTTCCCAATACGCCTATGCCAAAAGCCATCACCGATTTTCTTCGTTCTGATTGGGTGGAAGAGAAAAGCACCACAGTGAATGATGATGCAGGGAAAGGTAATCCCGGAGGCACCACAGTGAATGTTGGAAAGGGAGGCGTAAACGTGAACACAGGAAAAGGAGGTAGTGGAACCAATGTCATTGTTGGTGGAAAAGGTGGAGGAGTTTCAGTGCATGCAGGCCACAAGGGTAAGCCTAAGCCTGTAAAAGTTGATGTTCCGCCATTTTTGTACAGTTATGCTGCCACTAAGACCCAATTACACGATAACCCCAATGTGGCACTCTTCTTCTTGGAAAAGGACTTGCACCCCGGAACAAAATTTGACTTGCACTTCACCAAAACCTCAAATCAAGCCACGTTCTTGCCCCGCCAAGTCTCCGATTCAATACCCTTTTCATCTAACAAGGTGGAAGATATATTTAACAAGCTCTCTGTTAAACCTGACTCAGAAGAGGCTAAAACCATGAAGAATACTATTAATGAGTGTGAAGAGAATGGCATTAAAGGTGAAGAAAAGTACTGTGCAACTTCACTTGAGTCTATGGTTGATTTTAGCACTTCAAAGCTTGGAAACAATGTTGAGGTTGTGTCCACGGAAGTTGATAAAGAAACGGGGTTGCAAAAATACGCTGTAACACAAGGAGTGAAGAAGTTTGGAGGGGACAAGGTGGTTGTGTGTCATAAGCAAAATTACCCATATGCTGTGTTTTATTGTCACAAAACAGTGACTACTAGAGCTTACTCTGTGCCTTTGGAGGGTGCTGAAGGTATCAGAGTTAAAGCAGTAGCAGTGTGCCACACTGATACATCTGAATGGAATCCCAAGCATTTGGCTTTTCAAGTGCTCAAAGTTAAGCCAGGAACTGTTCCGGTTTGTCACTTCCTTCCTGAGGATCACGTTGTTTGGGTTCCCAAGTAG 1056 0.4432 MEYPLLPIFALLNLAMVATHAALPPEIYWKSVLPNTPMPKAITDFLRSDWVEEKSTTVNDDAGKGNPGGTTVNVGKGGVNVNTGKGGSGTNVIVGGKGGGVSVHAGHKGKPKPVKVDVPPFLYSYAATKTQLHDNPNVALFFLEKDLHPGTKFDLHFTKTSNQATFLPRQVSDSIPFSSNKVEDIFNKLSVKPDSEEAKTMKNTINECEENGIKGEEKYCATSLESMVDFSTSKLGNNVEVVSTEVDKETGLQKYAVTQGVKKFGGDKVVVCHKQNYPYAVFYCHKTVTTRAYSVPLEGAEGIRVKAVAVCHTDTSEWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVWVPK* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1141 351 Pfam BURP domain 140 350 IPR004873 -
Apr5g1141 351 ProSiteProfiles BURP domain profile. 141 351 IPR004873 -
Apr5g1141 351 SMART BURP_2 139 351 IPR004873 -
Apr5g1141 351 MobiDBLite consensus disorder prediction 56 81 - -
Apr5g1141 351 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 7 59 IPR044816 -
Apr5g1141 351 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 92 350 IPR044816 -
Apr5g1141 351 PANTHER BURP DOMAIN-CONTAINING PROTEIN-RELATED 7 59 - -
Apr5g1141 351 PANTHER BURP DOMAIN-CONTAINING PROTEIN-RELATED 92 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1141 Apr-Chr5 15996462 15999481 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1141 - - gmx:100799031 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1141 5 15996462 15999481 Apr5g1141 5 15996462 15999481 ECH