Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1140 ATGGACTACTGCATGCGAGAAATAGAAGGAAAGCAAGCACATGACCCTTTGTTCATGAATAATAATTATAATAACATGTCTTCATCTTCCACTGAGAGATGTGTATGGGTTGATGGGCCTGTGATTGTAGGAGCTGGGCCTTCTGGGCTTGCAGTAGCAGCATGTCTCAAAGAGAAAAGAATCCAAAGTGTAATACTAGAGAGATCTAATTGCATAGCTTCTCTGTGGCAGCTTAAAACCTATGATCGTTTACGCCTTCATTTACCAAAGCAATTCTGTGAACTCCCCTTTATGGGGTTCCCTTCTGATTTCCCAACGTACCCATCAAAGCAGCAGTTCATAGAGTACTTGGAGAGTTACGCAGAGGGGTTTGGAATTAGGCCAAGGTTCAATGAGACGGTGAAGCATGCAGAGTTTGATGCAAAGCTTGGCTTTTGGCGCTTGAAGAGTTTTAACAAGGCGGAGAAGACGACGGAGTATGTGTGCCGGTGGTTGATTGTGGCCACCGGAGAGAATGCAGAGGCGGTGGTGCCTGATATTGAAGGAATAGAGGAATTTGAAGCACCCATAAGGCATACAAGTTTGTATAAAAGTGGTGAAGAGTTTAGAGGGAAGAGGGTTTTGGTGGTGGGGTGTGGGAATTCGGGTATGGAAGCGTGCTTAGATCTTTGCAACAATAATGCTACTCCATCACTTGTGGTCAGAGATACAGTACACGTTCTACCACGAGAGATGCTGGGAAAATCAACTTTTGGGTTGTCCATGTGGTTGCTCAAGTGGTTACCCATGCGACTTGTCGATCGGTTCTTGCTAATAGTGTCATGGCTTATGCTTGGTGACACTGCTCGATTCGGATTGGACCGGCCTCGTTTGGGTCCTCTTGAACTCAAAAACCTTTCTGGAAAGACCCCTGTGCTAGACGTGGGTACCCTTGCCAAGATTAAAGGTGGAGACATTAAGGTACGTCCAGGCATTAAGCGGCTTAAACGTCAAACAGTGGAATTTGTAGACGGAAGGACAGAGAATTATGATGCAATCATATTGGCAACGGGTTACAAAAGCAGTGTACCCTATTGGCTCAAGGAAGAAGATATGTTCTCCAAGGAAGATGGGTACCCGAAGAGGCCATTCCCAAATGGATGGAAGGGTAAAAATGGGCTCTATGCGGTGGGTTTTACCAAAAAGGGTCTACTTGGTGCGTACATGGATGCCAAGAGAATAGCAGAAGACATTGAACGGTGTTGGGAAGCTGAGGCAAAGCATAGAACTGCGTTTGCACGCTCCCACTTGCCGCTACCAAATTCATAA 1308 0.4595 MDYCMREIEGKQAHDPLFMNNNYNNMSSSSTERCVWVDGPVIVGAGPSGLAVAACLKEKRIQSVILERSNCIASLWQLKTYDRLRLHLPKQFCELPFMGFPSDFPTYPSKQQFIEYLESYAEGFGIRPRFNETVKHAEFDAKLGFWRLKSFNKAEKTTEYVCRWLIVATGENAEAVVPDIEGIEEFEAPIRHTSLYKSGEEFRGKRVLVVGCGNSGMEACLDLCNNNATPSLVVRDTVHVLPREMLGKSTFGLSMWLLKWLPMRLVDRFLLIVSWLMLGDTARFGLDRPRLGPLELKNLSGKTPVLDVGTLAKIKGGDIKVRPGIKRLKRQTVEFVDGRTENYDAIILATGYKSSVPYWLKEEDMFSKEDGYPKRPFPNGWKGKNGLYAVGFTKKGLLGAYMDAKRIAEDIERCWEAEAKHRTAFARSHLPLPNS* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1140 435 SUPERFAMILY FAD/NAD(P)-binding domain 41 240 IPR036188 -
Apr5g1140 435 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 27 424 - -
Apr5g1140 435 SUPERFAMILY FAD/NAD(P)-binding domain 203 414 IPR036188 -
Apr5g1140 435 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 27 424 - -
Apr5g1140 435 Gene3D - 40 420 IPR036188 -
Apr5g1140 435 PRINTS FAD-dependent pyridine nucleotide reductase signature 40 59 - -
Apr5g1140 435 PRINTS FAD-dependent pyridine nucleotide reductase signature 206 224 - -
Apr5g1140 435 PRINTS Pyridine nucleotide disulphide reductase class-II signature 39 61 - -
Apr5g1140 435 PRINTS Pyridine nucleotide disulphide reductase class-II signature 202 226 - -
Apr5g1140 435 Pfam Flavin-binding monooxygenase-like 42 359 IPR020946 GO:0004499|GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1140 Apr-Chr5 15973815 15977270 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1140 K11816 - gmx:100799546 793.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1140 5 15973815 15977270 Apr5g1140 5 15973815 15977270 ECH