Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1138 ATGGGTTATTTTCACTATGGAAGACAGGGTGTTAGGCACATATTTAGATTTAAAAGTGCGACGGGCGTGGTTAGAAATTCTGTTAGGTCTCAATTGACTTGTGCTGTCACTGCATTTTCCTCCGATTTCCCTTTTCTCTTGAAGAGTCTCTATTCCACTACTTCGGACTCGAGAATAGTTCAGGACCTTCTGAGTCAGGTGGAGAAGGACAGGCTCAGGGAGAAAAATGAGAGAACGAGGCTGGGTTTGGACACTGCCGACATCGATGCCGAGTACGAAGAGGACTACATGCGCGTTGGCCCTCTCATTGACAAGCTTCGAAAGGAGAGTCTCAAGGATGACCCCGAATTGAACCGCTATGAAGAGCCAACAGATTCCGACAGCGATGAGGAAGACAATGAGGAGGTCCAGAAGAGGTTTCGTGATTTCGAGAGGAAGTTTGAGAAGCACCAGGACTTGCTCAAGGGCTTTACTGATGCTGAAACGCTTGACGATGCCTTCAAGTGGATGAACAAGATTGACAAGTTTGAACAGAAACATTTCAGGCTTCGCCCTGAGTACAGGGTCATTGGGGAGCTCATGAACCGCCTCAAAGTAGCGACTGAGATAAGGGAAAAGTTCATTCTGCAGAACAAGCTTAATAGGGCCTTGAGATTGGTGCAGTGGAAGGAAGCTTATGATCCTGATAACCCTGCCAATTATGGTATCATTCAACATGAAAATGCGGATACACTGCAAGATGCTGGCTTTGAAAAGGAGCAGCAAATCACAGAAGGAGATAATGCTCCTGCTGCTGTTGATGACGATGATGAAGAAGAGTTTGATGACTTGAAAGAAAAAGATAGTGTGCTACTGGCCAAACTTGAAGCTATTGACAAGAAACTTGAGGAGAAGCTAGCAGAACTTGAATATACATTTGGGAGGAAGGGTAAGGCTCTAGAGGAAGAGATCAAAGATCTTGCAGAGGAGAGAAATGAGTTAACTGAGGAAAAAAGAAAGCCTCTTTATCGAAAGGGTTTTGATGTAAAAATGATAGACATGAACCGAACTTGTAAAGTTACAAAGGGAGGGCAAGTTATTAAGTATACTGCTATGGTAGCTTGTGGCAACTATAATGGTGTTATCGGTTTTGCCAAAGCCAAAGGCCCTGCAGTCCCAGTTGCCCTTCAAAAGGCATATGAGAAATGCTTTCAAAATTTGCATTATGTAGAGCGACATGAGGAGCATACAATTGCACATGCAGTACAAACATCTTATAAGAAGACTAAGGTGTATCTCTGGCCTGCTCCCACAACAACTGGTATGAAAGCTGGCAGAATAGTCCAAAACATACTGCATTTAGCTGGTTTTAAGAATGTCAAGTCAAAGGTCATTGGTTCCCGAAATCCTCATAATACAGTTAAGGCTGTCTTCAAAGCGCTTAATGCGGTTGAAACGCCAAGGGATGTGCAAGAGAAGTTTGGCAGGACTGTGGTTGAGAGCTATCTGTTGTGA 1494 0.4398 MGYFHYGRQGVRHIFRFKSATGVVRNSVRSQLTCAVTAFSSDFPFLLKSLYSTTSDSRIVQDLLSQVEKDRLREKNERTRLGLDTADIDAEYEEDYMRVGPLIDKLRKESLKDDPELNRYEEPTDSDSDEEDNEEVQKRFRDFERKFEKHQDLLKGFTDAETLDDAFKWMNKIDKFEQKHFRLRPEYRVIGELMNRLKVATEIREKFILQNKLNRALRLVQWKEAYDPDNPANYGIIQHENADTLQDAGFEKEQQITEGDNAPAAVDDDDEEEFDDLKEKDSVLLAKLEAIDKKLEEKLAELEYTFGRKGKALEEEIKDLAEERNELTEEKRKPLYRKGFDVKMIDMNRTCKVTKGGQVIKYTAMVACGNYNGVIGFAKAKGPAVPVALQKAYEKCFQNLHYVERHEEHTIAHAVQTSYKKTKVYLWPAPTTTGMKAGRIVQNILHLAGFKNVKSKVIGSRNPHNTVKAVFKALNAVETPRDVQEKFGRTVVESYLL* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1138 497 Pfam Ribosomal protein S5, N-terminal domain 340 404 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Apr5g1138 497 SUPERFAMILY dsRNA-binding domain-like 336 405 - -
Apr5g1138 497 Pfam Ribosomal protein S5, C-terminal domain 419 486 IPR005324 GO:0003735|GO:0005840|GO:0006412
Apr5g1138 497 Coils Coil 126 153 - -
Apr5g1138 497 Gene3D - 290 401 - -
Apr5g1138 497 SUPERFAMILY Ribosomal protein S5 domain 2-like 409 487 IPR020568 -
Apr5g1138 497 Gene3D - 405 495 IPR014721 -
Apr5g1138 497 PANTHER 28S RIBOSOMAL PROTEIN S5, MITOCHONDRIAL 78 497 - -
Apr5g1138 497 PANTHER RIBOSOMAL S SUBUNIT 78 497 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Apr5g1138 497 Coils Coil 285 305 - -
Apr5g1138 497 Coils Coil 310 333 - -
Apr5g1138 497 ProSiteProfiles S5 double stranded RNA-binding domain profile. 340 403 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Apr5g1138 497 MobiDBLite consensus disorder prediction 114 135 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1138 K02988 - gmx:100809192 729.169