Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1137 ATGGTCCTTCTTCACCTCCCAAGGTTCCCTCTCTACTTTGTAGCCTCAGCTCACTCACTTTCCCTCCGAACTTGTTCCACTCCCTCCATAAACACCCTCTTACACTTACACGCACCCAAATCCACTCTCACCACCTCAGAACCCGAAACCATAACCCCTTCCCCATCAGAGTTGTCCCTCGAGAAGCTCTTTATACCACCGGATACTCCTGTTTCACTGGACAGTGCCAGAATCCTCAATGGTTCAAACATCTTGCTCAGCAACTACGCTGATGATGCTCTGGTTTCGCAAGCCGAATTTGTGAAAAGCAGTGTGAGAACCGAAGATTGCCCCTCCGATGGCCTCCCCGAGTTCGCTCTCGTTGGACGCTCCAATGTTGGCAAATCATCGCTCCTTAATTCTCTCGTGCGTCGCAAGAAACTCGCCTTAACTTCGAAGAAACCTGGAAAAACACAATGCATTAACCATTTTCGGATTAATAATAGCTGGTATCTGGTTGATTTGCCTGGCTATGGGTATGCATCTGCACCGCAGGAACTTAGAATGGATTGGGGAAATTTTACCAAGGACTATTTCCTTAACCGGTCAACCTTAGTTTCAGTATTCCTTTTAATAGATGCTAGCATCCCAGCTAAAAAAATTGATCTTGAGTATGCCAGTTGGTTGGGTCAGAATCAGATCCCAATGACATTAATCTTCACCAAATGTGACAAACGGAAGAAGAAAAAGAATGGAGGCAAAAGGCCAGAAGAAAACATCAATGATTTTCAGGACTTGATCCGTGGCTTCTTTGAAACAGTGCCTCCATGGATCATGACCAGTAGTGTCACCAATCAGGGTCGTGATGAGATACTCCTCCATATGGCCCAGCTACGAAACTACTGGCTCAAGCACTAG 897 0.4615 MVLLHLPRFPLYFVASAHSLSLRTCSTPSINTLLHLHAPKSTLTTSEPETITPSPSELSLEKLFIPPDTPVSLDSARILNGSNILLSNYADDALVSQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINNSWYLVDLPGYGYASAPQELRMDWGNFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEYASWLGQNQIPMTLIFTKCDKRKKKKNGGKRPEENINDFQDLIRGFFETVPPWIMTSSVTNQGRDEILLHMAQLRNYWLKH* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1137 298 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 40 295 - -
Apr5g1137 298 PANTHER MSS1/TRME-RELATED GTP-BINDING PROTEIN 40 295 - -
Apr5g1137 298 Gene3D - 90 294 IPR027417 -
Apr5g1137 298 CDD YihA_EngB 117 291 IPR030393 GO:0005525
Apr5g1137 298 TIGRFAM GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 98 286 IPR019987 GO:0005525
Apr5g1137 298 Hamap Probable GTP-binding protein EngB [engB]. 103 292 IPR019987 GO:0005525
Apr5g1137 298 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 114 294 IPR030393 GO:0005525
Apr5g1137 298 Pfam 50S ribosome-binding GTPase 118 235 IPR006073 GO:0005525
Apr5g1137 298 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 294 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1137 Apr-Chr5 15949421 15953430 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1137 K03978 - gmx:100800610 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1137 5 15949421 15953430 Apr5g1137 5 15949421 15953430 ECH