Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1129 ATGCGCCCACCGGTTAATCTCAAAACTACCACTCCCTCTGATTCTTATTATTCTTATTCTTCGTCTTCTTCTCCACCCAGCGATCGTAGACTCAACATTATCGCAAACCACTTTGTTCACGTTCGCGATCAAATGGATTCTCACGATAACATCTCTGTTTCGTCAACTGCAGCTTCTAATTCCATCTTCGCTCACCTTGTTCGTGCTCCTGAAGATCCTATCCTCGGGGTGACTGTTGCTTATAACAAAGATCCAAGTCCAGTTAAGCTCAACTTGGGTGTTGGTGCTTACCGAACTGAGGAAGGAAAACCTCTCGTTTTGAACGTAGTGAGGCGAGTTGAACAACAGCTATTGAATGAAGTGTCACGCAACAAGGAATATCTTCCAATTGTTGGGCTCGCTGATTTTAATAAATTGAGTGCTAAGCTTATTTTTGGTGCTGACAGCCCTGCTATCCAAGAAAACAGGGTTACCACTGTTCAAGGCTTGTCTGGGACTGGTTCATTAAGAGTTGGGGGAGAATTTTTGGCTAAACACTATCACCAACGGACTATATACCTGCCAACACCAACTTGGGGCAATCACCCTAAGGTTTTCAACTTGGCAGGTTTATCTGTCAAAACATATCGCTACTATGCTCCAGCAACACGAGGGCTCGACTTTCAAGGACTTCTGGAAGATCTTGGTTCTGCCCCATCTGGATCTATTGTTTTGCTACATGCATGTGCGCATAACCCTACTGGGGTTGATCCAACCCTTGAGCAATGGGAGCAGATTAGGCAGTTAATAAGATCAAAAGCTTTGTTACCTTTCTTTGACAGTGCTTATCAGGGTTTTGCTAGCGGAAGTCTAGATGCTGATGCACAGCCTGTTCGTTTGTTTGCTGCTGATGGGAGTGAATTGCTGGTTGCACAAAGTTATGCAAAGAACATGGGTCTTTATGGAGAACGTGTTGGTGCCTTGAGCATTGTCTGCAAGTCAACTGATGTTGCAAGCAACGTTGAGAGCCAGCTGAAACTTGTGATTAGGCCCATGTACTCAAATCCTCCCATTCATGGAGCATCCATTGTGGCTGCCATTCTCAAGGACCGGGATTTATTCAATGAGTGGACTATTGAGTTGAAGGCAATGGCTGATCGAATTATCAATATGCGCCAGCAACTTTTTGATGCTTTACGTGCCAGAGGCACACCTGGTGATTGGAGTCACATTATCAAACAGATCGGAATGTTTACTTTCACAGGATTGAATTCCGAGCAAGTTTCCTTCATGACTAAAGAGTATCATATATACATGACATCCGATGGGAGGATTAGCATGGCTGGTTTGAGTTCCAAAACAGTGCCACATCTCGCGGATGCAATACATGCAGCTGTTACCCGAGCTGCCTAA 1392 0.4468 MRPPVNLKTTTPSDSYYSYSSSSSPPSDRRLNIIANHFVHVRDQMDSHDNISVSSTAASNSIFAHLVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRRVEQQLLNEVSRNKEYLPIVGLADFNKLSAKLIFGADSPAIQENRVTTVQGLSGTGSLRVGGEFLAKHYHQRTIYLPTPTWGNHPKVFNLAGLSVKTYRYYAPATRGLDFQGLLEDLGSAPSGSIVLLHACAHNPTGVDPTLEQWEQIRQLIRSKALLPFFDSAYQGFASGSLDADAQPVRLFAADGSELLVAQSYAKNMGLYGERVGALSIVCKSTDVASNVESQLKLVIRPMYSNPPIHGASIVAAILKDRDLFNEWTIELKAMADRIINMRQQLFDALRARGTPGDWSHIIKQIGMFTFTGLNSEQVSFMTKEYHIYMTSDGRISMAGLSSKTVPHLADAIHAAVTRAA* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1129 463 SUPERFAMILY PLP-dependent transferases 61 461 IPR015424 -
Apr5g1129 463 Pfam Aminotransferase class I and II 89 455 IPR004839 GO:0009058|GO:0030170
Apr5g1129 463 Gene3D Aspartate Aminotransferase, domain 1 68 455 IPR015422 GO:0003824
Apr5g1129 463 PRINTS Aspartate aminotransferase signature 237 256 IPR000796 GO:0006520|GO:0008483
Apr5g1129 463 PRINTS Aspartate aminotransferase signature 268 280 IPR000796 GO:0006520|GO:0008483
Apr5g1129 463 PRINTS Aspartate aminotransferase signature 336 361 IPR000796 GO:0006520|GO:0008483
Apr5g1129 463 PRINTS Aspartate aminotransferase signature 404 422 IPR000796 GO:0006520|GO:0008483
Apr5g1129 463 MobiDBLite consensus disorder prediction 1 27 - -
Apr5g1129 463 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 306 319 IPR004838 GO:0003824|GO:0009058|GO:0030170
Apr5g1129 463 CDD AAT_like 90 443 - -
Apr5g1129 463 Gene3D - 122 363 IPR015421 GO:0003824
Apr5g1129 463 PANTHER ASPARTATE AMINOTRANSFERASE 60 462 IPR000796 GO:0006520|GO:0008483
Apr5g1129 463 PANTHER ASPARTATE AMINOTRANSFERASE 60 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1129 Apr-Chr5 15884718 15889092 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1129 K14454 - gmx:547509 813.142