Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1128 ATGGCGAACCAGGATTACGAAGAGCGCCAGCAACCTCAGGAGCTAGGGTACGACCCTAACTTCGTACCAGACTCGGTGAAATCGTTCGTGGTGCACCTGTACCGTCACATCCGTGAGAAGAACGTGTACGAGATCCACCAGATGTACGAGAGTTCGTTCCAAACCCTATCGGAGCGTCTCTTCAAGGACACTCCCTGGCCCTCCGTCGACGCCGTGGCTCACTACGTCGACAACGACCACGTGTTCTGTCTCCTCTACCGCGAGATGTGGTTCCGCCACCTCTACGCGCGCCTCACCCCCACGCTCCGCCAGAGGATCGATTCATGGGACAACTATTGCAGCCTCTTCCAAGTCGTTTTACACGGCGTCGTCAACATGCAGCTTCCGAACCAGTGGCTCTGGGATATGGTCGACGAGTTCGTTTATCAGTTTCAGAGCTTCTGTCAATACCGTGCGAAGATGAAGAACAAGACCGAACAAGAGATTGCTCTACTGAGACAGTTCGACCAGGCTTGGAACGTTTATGGCGTTCTCAATTTCTTGCAAGCGCTTGTTGAGAAGTCCGCTATCATTCAGATTCTCGAGCAGGAGAAGGAGGGGCTTGAACAGTTCACGACTACTGATGGATATGATTATGATGGAGGGAGTAATGTGTTGAAGGTTTTGGGGTATTTCAGCATGGTTGGCTTGCTTAGGGTTCATTGCCTTTTGGGGGATTATCACACTGGTCTCAAGTGCTTGCTTCCTATTGATATTAGTCAACAGGGTGTTTACACCAGCGTTATTGGTAGCCACATTACCACCATTTATCACTATGGCTTTGCCAATCTTATGCTCCGCAGATATGTGGAAGCAATTCGTGAATTTAATAAAATTCTCTTGTACATCTATAAGACGAAGCAGTATCATCAGAAATCTCCACAATATGAACAAATACTGAAAAAGAATGAACAGATGTATGCCTTGCTGGCAATTTGTCTTTCACTCTGCCCCCAAAGCAGACTTGTTGATGAAACTGTGAACTCTCAGTTGCGAGAGAAGTATGGTGAGAAGATGGTTAGAATGCAGAGATATGATGATGAGGCATTCGCTATCTATGATGAGCTCTTCTCATACGCATGCCCCAAGTTCATTACTCCTTCAGCACCTAGTTTTGAGGAGCCTCTAGTAAATTACAACCAGGATGCCTATAGACTTCAATTGAAATTGTTCCTTTATGAAGCAAAGCAACAACAGTTGTTATCTGGTGTGCGAACCTTCTTGAAAGTGTATTCAACAATCTCCCTTGCAAAACTTGCAAGTTACATGGAAGTGGATGAACCTACCTTAAGGACTATCTTGATGACTTACAAGCATAAAACACATGCTGTTGATAGTGATGGAAAAATTATATCCAATGCTGATGTGGATTTCTATATTGATGATGACATAATTCATGTCGTGGAGTCTAAGCCTGCGAAACGCTATGGGGATTACTTCTTGCGTCAGATTGTCAAGCTTGAAGGGGTGATCAATGAGATGGACGGTATAAAGCTGGAGTGA 1542 0.4559 MANQDYEERQQPQELGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYESSFQTLSERLFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQFDQAWNVYGVLNFLQALVEKSAIIQILEQEKEGLEQFTTTDGYDYDGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPIDISQQGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIYKTKQYHQKSPQYEQILKKNEQMYALLAICLSLCPQSRLVDETVNSQLREKYGEKMVRMQRYDDEAFAIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGVRTFLKVYSTISLAKLASYMEVDEPTLRTILMTYKHKTHAVDSDGKIISNADVDFYIDDDIIHVVESKPAKRYGDYFLRQIVKLEGVINEMDGIKLE* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1128 513 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 17 512 IPR019382 GO:0003743|GO:0005737|GO:0005852
Apr5g1128 513 Pfam RNA polymerase I-associated factor PAF67 104 499 IPR019382 GO:0003743|GO:0005737|GO:0005852
Apr5g1128 513 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT L 17 512 - -
Apr5g1128 513 ProSiteProfiles PCI domain profile. 288 487 IPR000717 -
Apr5g1128 513 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 11 502 IPR019382 GO:0003743|GO:0005737|GO:0005852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1128 K15029 - gmx:100804691 1018.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1128 5 15877519 15881997 Apr5g1128 5 15877519 15881997 ECH