Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1125 ATGGTAAATTCCTTGGTTGAACGTGCCACGAGCAGCATGCTCGTGGGCCCTGATTGGGCTTTGAACATGGAGATCTGTGACATACTCAATCGTGAACCTGGGCAAACAAAGGATGTTGTTAAAGGCATAAAGAAGCGGATTGGAAATAAAGTTCCTAGAGTTCAACTTCTTGCACTAACTCTGCTGGAGACGATGGTAAAGAATTGTGGGGACATTGTCCACATGCATATTGCCGAGAGAGATATTGTTCATGAGATGGTGAAAATAGTAAAGAAGAAGCCTGATTATCATGTCAGAGAGAAGATACTGATCCTTATAGATACTTGGCAAGAAGCTTTAGACGGGCCAAGGCCAAGATATCCACAGTATTATGCTGCATACCAGGAACTGCTGCATGCTGGTGTAACATTCCCTCAGAGGTCTGACCAATCTGCACCTGTATTCACACCACCACAAACATTACCTTTGACATCATACCCGCAAAATATACGAGATTCTGTTGGTCGACAAGACACAGCTGAGTCCTCAGCAGAGACTGAGTTTCCAACCCTAAGTTTGACTGAAATTCAGAATGCACGTGGTATTATGGATGTTCTTGCAGAAATGCTCAATGCATTAGACCCTGGTAACAAAGAAGGGCTTCAGCAGGAAGTTATTGTGGATTTGGTGGAGCAATGTAGAACATACAAGCAGAGAGTGGTGCACCTTGTTAATTCAACCTCGGATGAGTCCCTGCTATGCCAAGGCTTAGCTCTGAATGACGATCTGCAGTGTTTACTGGCTAAGCATGAATCCATTGCTTCGGAAACTTCTGCTGAAAATCATACTGAGAAACCGAAGCCTGAACCTACTGAAGCAGTTGTAGCTGTTGATGTTCCTTTGATTGATATTGGAGATACTAGTAAACAAACTGATGGGAGATCGTCTCCTAGTGGCGAAGGAGGATCTGAAACATTGAATCAGTTATTGCTTCCTGCACCCTCCACATCAAACGGATCAGTTCCCCTTGCGATGGTTGATCCCAAAGTGGACCTGCTCAGTGGTGACGACTATAACTCACCAAAAGCGGAGACTTCACTTGCTCTCGTTCCTCTGGGAGAACAGCAGCCAACCATCCCTGTTCCTCAGCAGAATGCCCTTGTTCTTTTTGATATGTTTACTAATGGAAGCAATTCACCTACTTCTGTTAACACCCCGCCAATTAATGTTGCTGGCCAAACCAGTCCGTTATCTCCCCAATTTCACCAACAGCAGACTTTAATATCTCAAGGTGTATTTTACCCCAACGGAAGTGTGCCAAATGTGGGTTCACCTCGTTATGAGCAATCACCATATATACAAAGTACAGGTCCTTCCTGGAACGGTCAGGTTGGGCAGCAGCAACAGCCACCTTCACCAGTTTATGGTATGCAGAGTGGTGGATCATTTCCACCACCTCCCTGGGAAGCTCAACCTACAGACATTGAGAGCCCAGTAGCAGGCAGTCAATATCCACAACCACTGCAAGTCACTCAAATGGTTGTGACACAGATACAAAGTGCTGCACATCGTCAGGGACCTCAAGCAATGGGGCATGACCAGGTTGTTGGAATGTATATGCAGCCGAATGTTGGCCATATGTCAATGATCAATAACCATGTTCAAAACAATCAGTTGGGCTTGCATCCTCAGCATATTCAGGGCGGTGCTGGTCCCTATATGGGTATGGTTTCCCATCAAATGCATAATGGTTCCGTGGCTTCCATGTATCCTCAACAGATGTATGGCAACCAATTCGTAGGATATGGCTATGGTCAGCAACAAGGGGTTCAACATGTTGAGCAGCAAATGTATGGTTTATCTGTGAGAGATGATGGCGCTTTGAGAGATTCTTACCAGGTTTCTCCTTCATCTTATGTGCCATCTGGGAAGCCTTACAAGCCAGAGAATAAGTTATTTGGGGACCTTGTTAATATGGCAAAAGTAAATCCAAAATCTACACCAGACCGAGCTATGTAG 1998 0.451 MVNSLVERATSSMLVGPDWALNMEICDILNREPGQTKDVVKGIKKRIGNKVPRVQLLALTLLETMVKNCGDIVHMHIAERDIVHEMVKIVKKKPDYHVREKILILIDTWQEALDGPRPRYPQYYAAYQELLHAGVTFPQRSDQSAPVFTPPQTLPLTSYPQNIRDSVGRQDTAESSAETEFPTLSLTEIQNARGIMDVLAEMLNALDPGNKEGLQQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQCLLAKHESIASETSAENHTEKPKPEPTEAVVAVDVPLIDIGDTSKQTDGRSSPSGEGGSETLNQLLLPAPSTSNGSVPLAMVDPKVDLLSGDDYNSPKAETSLALVPLGEQQPTIPVPQQNALVLFDMFTNGSNSPTSVNTPPINVAGQTSPLSPQFHQQQTLISQGVFYPNGSVPNVGSPRYEQSPYIQSTGPSWNGQVGQQQQPPSPVYGMQSGGSFPPPPWEAQPTDIESPVAGSQYPQPLQVTQMVVTQIQSAAHRQGPQAMGHDQVVGMYMQPNVGHMSMINNHVQNNQLGLHPQHIQGGAGPYMGMVSHQMHNGSVASMYPQQMYGNQFVGYGYGQQQGVQHVEQQMYGLSVRDDGALRDSYQVSPSSYVPSGKPYKPENKLFGDLVNMAKVNPKSTPDRAM* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1125 665 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Apr5g1125 665 MobiDBLite consensus disorder prediction 298 334 - -
Apr5g1125 665 MobiDBLite consensus disorder prediction 301 334 - -
Apr5g1125 665 Pfam GAT domain 194 266 IPR004152 GO:0035091|GO:0043130
Apr5g1125 665 Gene3D - 1 148 IPR008942 -
Apr5g1125 665 PANTHER TARGET OF MYB PROTEIN 1-LIKE ISOFORM X1 1 657 - -
Apr5g1125 665 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Apr5g1125 665 CDD GAT_GGA_like_plant 188 266 - -
Apr5g1125 665 SUPERFAMILY GAT-like domain 141 268 - -
Apr5g1125 665 CDD VHS 2 130 - -
Apr5g1125 665 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Apr5g1125 665 Gene3D - 184 275 IPR038425 -
Apr5g1125 665 Pfam VHS domain 3 130 IPR002014 GO:0035091|GO:0043130
Apr5g1125 665 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Apr5g1125 665 PANTHER TOM1-LIKE PROTEIN 1 657 IPR044836 GO:0035091|GO:0043130|GO:0043328
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1125 Apr-Chr5 15845613 15852776 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1125 - - gmx:100805762 1081.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1125 5 15845613 15852776 Apr5g1125 5 15845613 15852776 ECH