Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1119 ATGGCCATGGCGATTAGGGTTTTTCTCATCCTTCTACTCTTTCTCTCATCTACTAATCTCAGCTCTTCGCTTTACGAAGATCAAGTTGGTCTCATGGACTGGCATCAACAGTATATTGGGAAAGTAAAGCAAGCTGTGTTCCATACTCAAAAGACCGGAAGAAAGCGTGTTTTAGTGTCTACGGAAGAGAATGTAGTAGCTTCGCTTGATCTTCGTCATGGAGAGATTTTTTGGAGGCATATTCTTGGGACCAACGATGTTATTGACGGACTTGATATTGCCCTCGGAAAATATGTCATTACACTTTCATCGGATGGAAGTATATTGAGAGCATGGAACCTTCCTGACGGACAGATGGTTTGGGAGTCTTCCCTTCAGGGCTCAAAGGCATCAAAGTCATCAAAGTCCTTATTATACATTCAGAAAAACTTGAAAGCTGAGAAGGATGATTTGATCCTTGTTTTTGGTAGAGGGTGCCTCCATGCTGTTTCCAGCATAGACGGTGAAGTTCTCTGGAGGAAAGATTTTGAGGGTGAAAGCATTGAGGTCAGCCATATTATTCACTCAACTGATGTGATCTATGTATCTGGTTTTGTTGGTTCTTCAAAGTTTTATATGTATGAACTGAATGCTAAAAATGGAGAGTTATTAAAGAATGGTCATGCAACACTTCCCTGTGGTACTTTTGGGGAATTATTATCTGTGTCAGGTGATAAGTTTGTGGTATTGGATGATATGAGGTCAAAGATATTAACAATAATCATCAAGAGTGGAGAGATTAGCTACAACCAGAAGCAGATCTCAGATCTCACCAAGGATTCATCCGGACAGGCAGTAATATTACCAACAAAGCTTTCAGAATTGTTTGCATTAAATACCAATTCACATGTTCTTTTAATTAAAGTGACAAATGAAGGTGACTTAGTGTTGGTGGACAAAGTTCATAATGCAGCAGCTTTTAGTGATGCCCTGTCAATTTCAGAGGGGCAGCACGCTTTTGCATTTGTTCAACACGGAGACAACAAAATTCACCTCTTTGTAAAGGATGTTAATGATTGGAATGCCGATTTGCTTAAGGAAAGTATCGTAATAGACCGTCAAAGAGGGAATATTGATAAGATTTTTATAAACAATTATGTGAGGACAGATAGAACACATGGTTTTAGAGCATTGATGGTAATGGAGGATCATTCACTCTTGTTAGTACAACAAGGAGAAATTGTCTGGAGTAGAGAGGATGGTCTTGCATCAGTTGTGGATGTAACAACGTCAGAACTACCTGTGGAAAAGGAAGGTGTATCAGTGGCAAAAGTTGAACAGAACCTCTTTGAATGGCTTAAGGGACATGTGCTGAAGCTCAAAGGAACTTTAATGATTGCAAGCCCTGAGGATGTAGTAGCTATTCAAGCACTGAGGTTGAGGAGTTCTGAGAAAAGCAAGATGACCCGGGATCATAATGGCTTTCGTAAGTTGCTTATAGTACTTACAAGGGCAGGAAAGGTTTTTGCTTTGCACACCGGAGATGGACGTGTAGTTTGGTCTATTCTACTTCATACTCTACGCAGATCAGAAGTGTGTGAAAATCCTGTTGGGCTTAACATATATCAGTGGCAGGTTCCACATCATCATGCATTGGATGAGAATCCATCTATCCTTGTAGTTGGGCGATGTGGACCAAGTTTGGCTGCACCAGCTGCTCTTTCTTTTATTGATGCGTACACAGGGAAGGAACTCAATTCTTTGAATCTTGCTCATACTGTTGCTCAAGTCATTCCACTGCCTTATACTGATTCTACTGAACAGCGTCTGCATCTAATTATAGATGTTAACCAACATGCATATTTATACCCAAGAACACCTGAAGCTATTAACATTCTGCAACGTGAGTTTTCAAATATGTACTGGTACTCAGTTGAGGCTGATAATGGTGTTATCAGAGGTCATGCCTTGAAGAGCAAGTGCATTGGCGAAGTAGGGGATGAATACTGCTTTGACTTCAGGGATTTATGGTCTATTGTATTCCCATCTGAATCAGAAAAGATTATTACAACAGTGACAAGAAAATCAAATGAGGTTGTTCATACTCAAGCAAAGGTTATGACAGACTACGATGTTATGTATAAGTATATATCAAAGAATGTACTTTTTGTCGCAAATGCAGCACCAAAAGCCAAGGGAGAAATTGGAACAGCAAGCCCAGAAGAGGCATGGCTGGTCATCTATATCATTGATACCGTGACTGGTCGCATATTGCATCGCATGACTCATCATGGTTGCCAGGGTCCTGTCCATACTGTATTTAGTGAAAACTGGGTTGTCTACCATTATTTTAATCTCAGAGCACACAGATATGAGATGTCAGTTGTTGAGGTCTATGATCAGTCTCGAGGGGATAATAAAGATGTTTGGAAGTTTGTTCTTGGGAAACATAATCTTACGTCGCCCATCTCCTCTTACTATCGACCAGAAGTCATAACAAAATCGCAGTCATACTTCTTTACCCATTCTGTGAAAGCAATTGCAGTGACTTCAACGGCGAAGGGTATAACGTCTAAGCAGCTTCTTATTGGAACAATCGGTGATCAGGTTCTGGCACTTGACAAACGCTTTTTGGATCCCCGGCGCACACTTAATCCCTCACAAGCTGAGAAAGAAGAAGGGATTATTCCTCTTACTGATTCGTTGCCCATCATTTCTCAGTCCTATATTACCCATTCCCTTAAGGTGGAAGGTCTACGAGGTATAGTAACAGTACCTGCCAAGCTGGAGTCTACATCCCTCGTCTTTGCCTATGGAGTAGATCTATATTTTACCCAGATTGCTCCTTCTAGAACTTACGATTCACTAACTGAAGATTTCAGCTATGCTCTACTTCTTTTAACTATTGTTGCACTCGTAGCAGCAATATTTGTCACTTGGGTATTATCAGAGAGGAAAGATCTCCAAGAGAAATGGAGATGA 2961 0.4066 MAMAIRVFLILLLFLSSTNLSSSLYEDQVGLMDWHQQYIGKVKQAVFHTQKTGRKRVLVSTEENVVASLDLRHGEIFWRHILGTNDVIDGLDIALGKYVITLSSDGSILRAWNLPDGQMVWESSLQGSKASKSSKSLLYIQKNLKAEKDDLILVFGRGCLHAVSSIDGEVLWRKDFEGESIEVSHIIHSTDVIYVSGFVGSSKFYMYELNAKNGELLKNGHATLPCGTFGELLSVSGDKFVVLDDMRSKILTIIIKSGEISYNQKQISDLTKDSSGQAVILPTKLSELFALNTNSHVLLIKVTNEGDLVLVDKVHNAAAFSDALSISEGQHAFAFVQHGDNKIHLFVKDVNDWNADLLKESIVIDRQRGNIDKIFINNYVRTDRTHGFRALMVMEDHSLLLVQQGEIVWSREDGLASVVDVTTSELPVEKEGVSVAKVEQNLFEWLKGHVLKLKGTLMIASPEDVVAIQALRLRSSEKSKMTRDHNGFRKLLIVLTRAGKVFALHTGDGRVVWSILLHTLRRSEVCENPVGLNIYQWQVPHHHALDENPSILVVGRCGPSLAAPAALSFIDAYTGKELNSLNLAHTVAQVIPLPYTDSTEQRLHLIIDVNQHAYLYPRTPEAINILQREFSNMYWYSVEADNGVIRGHALKSKCIGEVGDEYCFDFRDLWSIVFPSESEKIITTVTRKSNEVVHTQAKVMTDYDVMYKYISKNVLFVANAAPKAKGEIGTASPEEAWLVIYIIDTVTGRILHRMTHHGCQGPVHTVFSENWVVYHYFNLRAHRYEMSVVEVYDQSRGDNKDVWKFVLGKHNLTSPISSYYRPEVITKSQSYFFTHSVKAIAVTSTAKGITSKQLLIGTIGDQVLALDKRFLDPRRTLNPSQAEKEEGIIPLTDSLPIISQSYITHSLKVEGLRGIVTVPAKLESTSLVFAYGVDLYFTQIAPSRTYDSLTEDFSYALLLLTIVALVAAIFVTWVLSERKDLQEKWR* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1119 986 PANTHER UNCHARACTERIZED 9 986 IPR026895 GO:0072546
Apr5g1119 986 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 55 589 IPR011047 -
Apr5g1119 986 SMART ire1_9 485 516 IPR018391 -
Apr5g1119 986 SMART ire1_9 708 755 IPR018391 -
Apr5g1119 986 SMART ire1_9 145 175 IPR018391 -
Apr5g1119 986 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 489 878 IPR011047 -
Apr5g1119 986 Pfam ER membrane protein complex subunit 1, C-terminal 768 985 IPR011678 -
Apr5g1119 986 Gene3D - 20 347 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1119 K23562 - gmx:100790095 1758.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1119 5 15784396 15792758 Apr5g1119 5 15784396 15792758 ECH